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  5. Sam_g08079

Sam_g08079


Description : not classified & original description: none


Gene families : OG0000548 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000548_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g08079

Target Alias Description ECC score Gene Family Method Actions
Als_g24761 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene51507.t1 Aspi01Gene51507 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0341.g065662 No alias not classified & original description: CDS=1-594 0.02 OrthoFinder output from all 47 species
Ceric.27G044500.1 Ceric.27G044500 not classified & original description: pacid=50605903... 0.06 OrthoFinder output from all 47 species
Dac_g17408 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g21748 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g40198 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g01205 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g01331 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g10571 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01014262001 No alias Photosynthesis.photophosphorylation.photosystem... 0.03 OrthoFinder output from all 47 species
Gb_09350 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_38230 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Len_g55744 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g10869 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g11717 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g15017 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g26109 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g08600 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g20992 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g29421 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g27189 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g30509 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g17222 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g57697 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0008.g004185 No alias not classified & original description: CDS=213-944 0.05 OrthoFinder output from all 47 species
Smo101278 No alias No description available 0.03 OrthoFinder output from all 47 species
Smo105772 No alias No description available 0.02 OrthoFinder output from all 47 species
Solyc03g079980.2.1 Solyc03g079980 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Spa_g01090 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g30337 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g00454 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g10500 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0004650 polygalacturonase activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006820 monoatomic anion transport IEP HCCA
BP GO:0007034 vacuolar transport IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:0140359 ABC-type transporter activity IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR006747 DUF599 16 223
No external refs found!