Sam_g08060


Description : not classified & original description: none


Gene families : OG0000001 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g08060

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00099p00112540 No alias No description available 0.02 OrthoFinder output from all 47 species
Aev_g38006 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g44899 ORF158 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aev_g45361 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aev_g47320 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g23362 ORF107E not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g32397 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g30360 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g08759 ORF158 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g18250 ORF158 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g22330 ORF107E not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene05728.t1 Aspi01Gene05728 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene28586.t1 ORF107E, Aspi01Gene28586 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene58361.t1 Aspi01Gene58361 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene67737.t1 Aspi01Gene67737 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g25742 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g32790 ORF158 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g44698 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g45221 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g36306 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005643 nuclear pore IEP HCCA
CC GO:0005739 mitochondrion IEP HCCA
CC GO:0005787 signal peptidase complex IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0006465 signal peptide processing IEP HCCA
BP GO:0007021 tubulin complex assembly IEP HCCA
BP GO:0007023 post-chaperonin tubulin folding pathway IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
MF GO:0009982 pseudouridine synthase activity IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
BP GO:0016485 protein processing IEP HCCA
MF GO:0016866 intramolecular transferase activity IEP HCCA
MF GO:0017056 structural constituent of nuclear pore IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
MF GO:0048487 beta-tubulin binding IEP HCCA
BP GO:0051604 protein maturation IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
CC GO:1905368 peptidase complex IEP HCCA
InterPro domains Description Start Stop
IPR041577 RT_RNaseH_2 57 124
No external refs found!