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  5. Sam_g07933

Sam_g07933


Description : not classified & original description: none


Gene families : OG0001046 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001046_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g07933

Target Alias Description ECC score Gene Family Method Actions
AT2G41370 BOP2 Ankyrin repeat family protein / BTB/POZ domain-containing protein 0.03 OrthoFinder output from all 47 species
AT5G45110 ATNPR3, NPR3 NPR1-like protein 3 0.02 OrthoFinder output from all 47 species
Ala_g12679 ATNPR3, NPR3 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g02149 ATNPR3, NPR3 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0015.g013694 BOP2 not classified & original description: CDS=1-1683 0.03 OrthoFinder output from all 47 species
Ceric.21G022600.1 BOP2, Ceric.21G022600 transcriptional co-activator *(BOP) & original... 0.02 OrthoFinder output from all 47 species
Len_g32492 NPR4, ATNPR4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc02g069310.3.1 ATNPR3, NPR3,... receptor protein (NPR3|4) 0.03 OrthoFinder output from all 47 species
Solyc07g040690.3.1 NPR1, SAI1,... salicylic acid receptor protein (NPR1). NPR1 systemic... 0.02 OrthoFinder output from all 47 species
Tin_g11830 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e018649_P001 BOP2, Zm00001e018649 transcriptional co-activator (BOP) 0.02 OrthoFinder output from all 47 species
Zm00001e028331_P001 BOP2, Zm00001e028331 transcriptional co-activator (BOP) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
MF GO:0005546 phosphatidylinositol-4,5-bisphosphate binding IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006887 exocytosis IEP HCCA
BP GO:0007034 vacuolar transport IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0032940 secretion by cell IEP HCCA
MF GO:0035091 phosphatidylinositol binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0046903 secretion IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
BP GO:0140352 export from cell IEP HCCA
MF GO:1901981 phosphatidylinositol phosphate binding IEP HCCA
MF GO:1902936 phosphatidylinositol bisphosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR000210 BTB/POZ_dom 67 208
IPR021094 NPR1/NIM1-like_C 398 593
IPR002110 Ankyrin_rpt 335 389
No external refs found!