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  5. Sam_g07909

Sam_g07909


Description : not classified & original description: none


Gene families : OG0000425 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000425_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g07909
Cluster HCCA: Cluster_176

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00013p00232570 evm_27.TU.AmTr_v1... ATPase family AAA domain-containing protein FIGL1... 0.02 OrthoFinder output from all 47 species
Adi_g023416 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g024938 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g055524 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene38622.t1 Aspi01Gene38622 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene38637.t1 Aspi01Gene38637 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g07758 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.21G078500.1 Ceric.21G078500 not classified & original description: pacid=50604341... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000655.31 No alias Katanin p60 ATPase-containing subunit A1 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Dcu_g13726 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g31555 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01008524001 No alias ATPase family AAA domain-containing protein FIGL1... 0.02 OrthoFinder output from all 47 species
Ore_g04513 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g08629 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0006.g002972 No alias not classified & original description: CDS=1-3879 0.05 OrthoFinder output from all 47 species
Solyc08g081740.3.1 Solyc08g081740 ATPase family AAA domain-containing protein FIGL1... 0.02 OrthoFinder output from all 47 species
Spa_g01811 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g26195 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e001631_P001 Zm00001e001631 ATPase family AAA domain-containing protein FIGL1... 0.04 OrthoFinder output from all 47 species
Zm00001e011359_P005 Zm00001e011359 ATPase family AAA domain-containing protein FIGL1... 0.02 OrthoFinder output from all 47 species
Zm00001e016412_P002 Zm00001e016412 ATPase family AAA domain-containing protein FIGL1... 0.03 OrthoFinder output from all 47 species
Zm00001e021043_P002 Zm00001e021043 ATPase family AAA domain-containing protein FIGL1... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR003959 ATPase_AAA_core 986 1115
IPR041569 AAA_lid_3 1139 1175
IPR000253 FHA_dom 157 225
No external refs found!