Sam_g07885


Description : E3 ubiquitin ligase & original description: none


Gene families : OG0000864 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000864_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g07885
Cluster HCCA: Cluster_114

Target Alias Description ECC score Gene Family Method Actions
Aev_g20302 No alias E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g04552 No alias E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g18599 No alias E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene61436.t1 Aspi01Gene61436 E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0149.g053237 No alias E3 ubiquitin ligase & original description: CDS=1-2427 0.03 OrthoFinder output from all 47 species
Cba_g05312 No alias E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.34G024200.1 Ceric.34G024200 E3 ubiquitin ligase & original description:... 0.05 OrthoFinder output from all 47 species
Dac_g45270 No alias E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01032672001 No alias U-box domain-containing protein 62 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Gb_03616 No alias U-box domain-containing protein 62 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Lfl_g30807 No alias E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
MA_10429276g0020 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp3g08800.1 No alias U-box domain-containing protein 62 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Ore_g19335 No alias E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g09636 No alias E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g17020 No alias E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0037.g011861 No alias E3 ubiquitin ligase & original description: CDS=473-2341 0.03 OrthoFinder output from all 47 species
Tin_g05129 No alias E3 ubiquiTin ligase & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP HCCA
MF GO:0002161 aminoacyl-tRNA editing activity IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
CC GO:0005875 microtubule associated complex IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006534 cysteine metabolic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008569 minus-end-directed microtubule motor activity IEP HCCA
BP GO:0009069 serine family amino acid metabolic process IEP HCCA
BP GO:0009092 homoserine metabolic process IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
BP GO:0019346 transsulfuration IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
CC GO:0030286 dynein complex IEP HCCA
BP GO:0050667 homocysteine metabolic process IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!