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  5. Sam_g07875

Sam_g07875


Description : not classified & original description: none


Gene families : OG0004233 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004233_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g07875

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00029p00244850 evm_27.TU.AmTr_v1... LIMR family protein At3g08930 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Aev_g02363 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0007.g011127 No alias not classified & original description: CDS=78-1616 0.02 OrthoFinder output from all 47 species
GSVIVT01033959001 No alias LIMR family protein At5g01460 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Mp5g20730.1 No alias LIMR family protein At3g08930 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e036634_P001 Zm00001e036634 LIMR family protein Os06g0128200 OS=Oryza sativa subsp.... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
MF GO:0004602 glutathione peroxidase activity IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
MF GO:0035091 phosphatidylinositol binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
InterPro domains Description Start Stop
IPR006876 LMBR1-like_membr_prot 9 278
IPR006876 LMBR1-like_membr_prot 280 492
No external refs found!