Sam_g07802

Description : component *(eS21) of small ribosomal-subunit (SSU) proteome & original description: none

Gene families : OG0004049 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004049_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Sam_g07802
Cluster	HCCA: Cluster_145

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00045p00200410	evm_27.TU.AmTr_v1...	Protein biosynthesis.cytosolic ribosome.small subunit...	0.06	OrthoFinder output from all 47 species
AT3G53890	No alias	Ribosomal protein S21e	0.05	OrthoFinder output from all 47 species
AT5G27700	No alias	Ribosomal protein S21e	0.07	OrthoFinder output from all 47 species
Aop_g23096	No alias	component *(eS21) of small ribosomal-subunit (SSU)...	0.05	OrthoFinder output from all 47 species
Azfi_s0022.g016110	No alias	component *(eS21) of small ribosomal-subunit (SSU)...	0.03	OrthoFinder output from all 47 species
Azfi_s0185.g056623	No alias	component *(eS21) of small ribosomal-subunit (SSU)...	0.06	OrthoFinder output from all 47 species
Azfi_s2932.g113764	No alias	component *(eS21) of small ribosomal-subunit (SSU)...	0.05	OrthoFinder output from all 47 species
Cba_g37485	No alias	component *(eS21) of small ribosomal-subunit (SSU)...	0.05	OrthoFinder output from all 47 species
Cba_g46482	No alias	component *(eS21) of small ribosomal-subunit (SSU)...	0.01	OrthoFinder output from all 47 species
Ceric.37G056600.1	Ceric.37G056600	component *(eS21) of small ribosomal-subunit (SSU)...	0.04	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00020780.14	No alias	Protein biosynthesis.cytosolic ribosome.small subunit...	0.01	OrthoFinder output from all 47 species
Cre03.g203450	No alias	Protein biosynthesis.cytosolic ribosome.small subunit...	0.1	OrthoFinder output from all 47 species
Dcu_g13598	No alias	component *(eS21) of small ribosomal-subunit (SSU)...	0.02	OrthoFinder output from all 47 species
Dcu_g34795	No alias	component *(eS21) of small ribosomal-subunit (SSU)...	0.02	OrthoFinder output from all 47 species
Dde_g15855	No alias	component *(eS21) of small ribosomal-subunit (SSU)...	0.04	OrthoFinder output from all 47 species
GSVIVT01017756001	No alias	Protein biosynthesis.cytosolic ribosome.small subunit...	0.08	OrthoFinder output from all 47 species
GSVIVT01031151001	No alias	Protein biosynthesis.cytosolic ribosome.small subunit...	0.06	OrthoFinder output from all 47 species
Gb_27652	No alias	component RPS21 of SSU proteome	0.05	OrthoFinder output from all 47 species
Gb_35516	No alias	component RPS21 of SSU proteome	0.04	OrthoFinder output from all 47 species
LOC_Os03g46490.1	LOC_Os03g46490	component RPS21 of SSU proteome	0.03	OrthoFinder output from all 47 species
MA_73657g0010	No alias	component RPS21 of SSU proteome	0.03	OrthoFinder output from all 47 species
Mp4g22150.1	No alias	component RPS21 of SSU proteome	0.08	OrthoFinder output from all 47 species
Ore_g39678	No alias	component *(eS21) of small ribosomal-subunit (SSU)...	0.02	OrthoFinder output from all 47 species
Pp3c24_8160V3.1	Pp3c24_8160	Ribosomal protein S21e	0.01	OrthoFinder output from all 47 species
Pp3c26_3000V3.1	Pp3c26_3000	Ribosomal protein S21e	0.04	OrthoFinder output from all 47 species
Sacu_v1.1_s0103.g020026	No alias	component *(eS21) of small ribosomal-subunit (SSU)...	0.03	OrthoFinder output from all 47 species
Smo271040	No alias	Protein biosynthesis.cytosolic ribosome.small subunit...	0.05	OrthoFinder output from all 47 species
Solyc01g066840.3.1	Solyc01g066840	component RPS21 of SSU proteome	0.05	OrthoFinder output from all 47 species
Solyc04g074910.3.1	Solyc04g074910	component RPS21 of SSU proteome	0.05	OrthoFinder output from all 47 species
Spa_g19976	No alias	component *(eS21) of small ribosomal-subunit (SSU)...	0.05	OrthoFinder output from all 47 species
Zm00001e001637_P002	Zm00001e001637	component RPS21 of SSU proteome	0.05	OrthoFinder output from all 47 species
Zm00001e011684_P002	Zm00001e011684	component RPS21 of SSU proteome	0.05	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0005741	mitochondrial outer membrane	IEP	HCCA
BP	GO:0006066	alcohol metabolic process	IEP	HCCA
BP	GO:0016311	dephosphorylation	IEP	HCCA
BP	GO:0019751	polyol metabolic process	IEP	HCCA
CC	GO:0019867	outer membrane	IEP	HCCA
CC	GO:0031090	organelle membrane	IEP	HCCA
CC	GO:0031966	mitochondrial membrane	IEP	HCCA
CC	GO:0031968	organelle outer membrane	IEP	HCCA
MF	GO:0035673	oligopeptide transmembrane transporter activity	IEP	HCCA
MF	GO:0042887	amide transmembrane transporter activity	IEP	HCCA
BP	GO:0043647	inositol phosphate metabolic process	IEP	HCCA
BP	GO:0044262	cellular carbohydrate metabolic process	IEP	HCCA
BP	GO:0044282	small molecule catabolic process	IEP	HCCA
BP	GO:0046164	alcohol catabolic process	IEP	HCCA
BP	GO:0046174	polyol catabolic process	IEP	HCCA
BP	GO:0046434	organophosphate catabolic process	IEP	HCCA
BP	GO:0046838	phosphorylated carbohydrate dephosphorylation	IEP	HCCA
BP	GO:0046855	inositol phosphate dephosphorylation	IEP	HCCA
BP	GO:0071545	inositol phosphate catabolic process	IEP	HCCA
CC	GO:0098588	bounding membrane of organelle	IEP	HCCA
BP	GO:1901615	organic hydroxy compound metabolic process	IEP	HCCA
BP	GO:1901616	organic hydroxy compound catabolic process	IEP	HCCA
MF	GO:1904680	peptide transmembrane transporter activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001931	Ribosomal_S21e	47	121

External Links

No external refs found!

Sam_g07802

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation