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  5. Sam_g07734

Sam_g07734


Description : not classified & original description: none


Gene families : OG0006741 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006741_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g07734
Cluster HCCA: Cluster_135

Target Alias Description ECC score Gene Family Method Actions
AT1G77090 No alias Mog1/PsbP/DUF1795-like photosystem II reaction center... 0.03 OrthoFinder output from all 47 species
Aev_g31777 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g01112 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Als_g12599 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g08421 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g10334 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.35G021700.1 Ceric.35G021700 not classified & original description: pacid=50580848... 0.07 OrthoFinder output from all 47 species
Cre03.g198950 No alias PsbP domain-containing protein 4, chloroplastic... 0.01 OrthoFinder output from all 47 species
Ehy_g04309 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01010018001 No alias PsbP domain-containing protein 4, chloroplastic... 0.04 OrthoFinder output from all 47 species
LOC_Os12g08830.1 LOC_Os12g08830 PsbP domain-containing protein 4, chloroplastic... 0.03 OrthoFinder output from all 47 species
Lfl_g35597 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_10428945g0010 No alias PsbP domain-containing protein 4, chloroplastic... 0.02 OrthoFinder output from all 47 species
Mp1g26600.1 No alias PsbP domain-containing protein 4, chloroplastic... 0.02 OrthoFinder output from all 47 species
Msp_g02718 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g26017 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g01184 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g05874 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g16097 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc04g064670.3.1 Solyc04g064670 PsbP domain-containing protein 4, chloroplastic... 0.03 OrthoFinder output from all 47 species
Spa_g19157 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
CC GO:0009523 photosystem II IEA Interproscan
CC GO:0009654 photosystem II oxygen evolving complex IEA Interproscan
BP GO:0015979 photosynthesis IEA Interproscan
CC GO:0019898 extrinsic component of membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
MF GO:0004359 glutaminase activity IEP HCCA
BP GO:0006081 cellular aldehyde metabolic process IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006766 vitamin metabolic process IEP HCCA
BP GO:0006767 water-soluble vitamin metabolic process IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0009110 vitamin biosynthetic process IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0015035 protein-disulfide reductase activity IEP HCCA
MF GO:0015036 disulfide oxidoreductase activity IEP HCCA
BP GO:0015969 guanosine tetraphosphate metabolic process IEP HCCA
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP HCCA
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP HCCA
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0019637 organophosphate metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0033865 nucleoside bisphosphate metabolic process IEP HCCA
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP HCCA
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP HCCA
BP GO:0034035 purine ribonucleoside bisphosphate metabolic process IEP HCCA
BP GO:0042364 water-soluble vitamin biosynthetic process IEP HCCA
BP GO:0042816 vitamin B6 metabolic process IEP HCCA
BP GO:0042819 vitamin B6 biosynthetic process IEP HCCA
BP GO:0042822 pyridoxal phosphate metabolic process IEP HCCA
BP GO:0042823 pyridoxal phosphate biosynthetic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0046184 aldehyde biosynthetic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0072524 pyridine-containing compound metabolic process IEP HCCA
BP GO:0072525 pyridine-containing compound biosynthetic process IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901615 organic hydroxy compound metabolic process IEP HCCA
BP GO:1901617 organic hydroxy compound biosynthetic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR002683 PsbP_C 178 321
No external refs found!