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  5. Sam_g07595

Sam_g07595


Description : small GTPase *(ROP) & original description: none


Gene families : OG0000503 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000503_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g07595

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00021p00186910 ATRAC11, ARAC11,... Multi-process regulation.Rop GTPase regulatory... 0.03 OrthoFinder output from all 47 species
AT1G75840 ATROP4, ROP4,... RAC-like GTP binding protein 5 0.04 OrthoFinder output from all 47 species
Adi_g003765 ARAC3, RAC3,... small GTPase *(ROP) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g051539 ARAC3, RAC3,... small GTPase *(ROP) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g051540 ATRAC11, ARAC11,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g13243 ARAC3, RAC3,... small GTPase *(ROP) & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g23892 ATRAC11, ARAC11,... small GTPase *(ROP) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g12798 ATRAC11, ARAC11,... small GTPase *(ROP) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g06146 ARAC3, RAC3,... small GTPase *(ROP) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g28429 ATRAC11, ARAC11,... small GTPase *(ROP) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g32654 ATRAC11, ARAC11,... small GTPase *(ROP) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g48079 ATRAC11, ARAC11,... small GTPase *(ROP) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g03079 ATRAC11, ARAC11,... small GTPase *(ROP) & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g38810 ARAC3, RAC3,... small GTPase *(ROP) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene35809.t1 ATRAC11, ARAC11,... small GTPase *(ROP) & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene50526.t1 ARAC3, RAC3,... small GTPase *(ROP) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0002.g001186 ATRAC11, ARAC11,... not classified & original description: CDS=1-612 0.03 OrthoFinder output from all 47 species
Azfi_s0032.g024979 ATRAC1, ROP3,... not classified & original description: CDS=801-1349 0.04 OrthoFinder output from all 47 species
Cba_g14200 ATRAC11, ARAC11,... small GTPase *(ROP) & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g27597 ATRAC11, ARAC11,... small GTPase *(ROP) & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.18G010600.1 ATRAC11, ARAC11,... small GTPase *(ROP) & original description:... 0.01 OrthoFinder output from all 47 species
Ceric.36G016200.1 ARAC3, RAC3,... small GTPase *(ROP) & original description:... 0.06 OrthoFinder output from all 47 species
Ceric.38G025400.1 ATRAC11, ARAC11,... small GTPase *(ROP) & original description:... 0.02 OrthoFinder output from all 47 species
Dde_g20297 ARAC3, RAC3,... small GTPase *(ROP) & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g51070 ARAC3, RAC3,... small GTPase *(ROP) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g27359 ATRAC11, ARAC11,... small GTPase *(ROP) & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01009947001 ATRAC1, ROP3,... Multi-process regulation.Rop GTPase regulatory... 0.02 OrthoFinder output from all 47 species
GSVIVT01018729001 ATRAC1, ROP3,... Multi-process regulation.Rop GTPase regulatory... 0.02 OrthoFinder output from all 47 species
GSVIVT01020653001 ATROP4, ROP4,... Multi-process regulation.Rop GTPase regulatory... 0.03 OrthoFinder output from all 47 species
LOC_Os02g20850.1 ATRAC1, ROP3,... small GTPase (ROP) 0.02 OrthoFinder output from all 47 species
LOC_Os02g50860.1 ATRAC8, ATROP10,... small GTPase (ROP) 0.04 OrthoFinder output from all 47 species
LOC_Os05g43820.1 ARAC7, ROP9,... small GTPase (ROP) 0.04 OrthoFinder output from all 47 species
Len_g18829 ARAC3, RAC3,... small GTPase *(ROP) & original description: none 0.03 OrthoFinder output from all 47 species
Len_g29378 ARAC3, RAC3,... small GTPase *(ROP) & original description: none 0.02 OrthoFinder output from all 47 species
Len_g29379 ATRAC11, ARAC11,... small GTPase *(ROP) & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g38022 ARAC3, RAC3,... small GTPase *(ROP) & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g11271 ATRAC11, ARAC11,... small GTPase *(ROP) & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g38983 ATRAC11, ARAC11,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g01865 ATRAC11, ARAC11,... small GTPase *(ROP) & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g13115 ATRAC11, ARAC11,... small GTPase *(ROP) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g27441 ATRAC11, ARAC11,... small GTPase *(ROP) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g04924 ATRAC11, ARAC11,... small GTPase *(ROP) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g11648 ATRAC11, ARAC11,... small GTPase *(ROP) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g14285 ATRAC11, ARAC11,... small GTPase *(ROP) & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0010.g004935 ATROP4, ROP4,... small GTPase *(ROP) & original description: CDS=382-930 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0031.g010640 ATRAC11, ARAC11,... not classified & original description: CDS=1-750 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0111.g020708 ARAC3, RAC3,... small GTPase *(ROP) & original description: CDS=388-1065 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0167.g024188 ATRAC11, ARAC11,... small GTPase *(ROP) & original description: CDS=374-982 0.05 OrthoFinder output from all 47 species
Sam_g51099 No alias small GTPase *(ROP) & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g51141 No alias small GTPase *(ROP) & original description: none 0.05 OrthoFinder output from all 47 species
Solyc01g088780.3.1 ARAC9, ATROP8,... small GTPase (ROP) 0.02 OrthoFinder output from all 47 species
Solyc02g077400.4.1 ARAC2, RAC2,... small GTPase (ROP) 0.02 OrthoFinder output from all 47 species
Spa_g04699 ATRAC11, ARAC11,... small GTPase *(ROP) & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g10601 ATRAC11, ARAC11,... small GTPase *(ROP) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g03089 ATRAC11, ARAC11,... small GTPase *(ROP) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g03146 ATRAC11, ARAC11,... small GTPase *(ROP) & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e032127_P001 ARAC7, ROP9,... small GTPase (ROP) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
MF GO:0005525 GTP binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004601 peroxidase activity IEP HCCA
MF GO:0005092 GDP-dissociation inhibitor activity IEP HCCA
MF GO:0005094 Rho GDP-dissociation inhibitor activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006952 defense response IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
BP GO:0007264 small GTPase mediated signal transduction IEP HCCA
BP GO:0007265 Ras protein signal transduction IEP HCCA
BP GO:0007266 Rho protein signal transduction IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016409 palmitoyltransferase activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0030247 polysaccharide binding IEP HCCA
MF GO:0030695 GTPase regulator activity IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
InterPro domains Description Start Stop
IPR001806 Small_GTPase 8 178
No external refs found!