Description : beta-type-1 component *(PBA) of 26S proteasome & original description: none
Gene families : OG0003808 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003808_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT4G31300 | PBA1 | N-terminal nucleophile aminohydrolases (Ntn hydrolases)... | 0.03 | OrthoFinder output from all 47 species | |
Adi_g063247 | PBA1 | beta-type-1 component *(PBA) of 26S proteasome &... | 0.03 | OrthoFinder output from all 47 species | |
Als_g55786 | PBA1 | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
Cba_g00458 | PBA1 | beta-type-1 component *(PBA) of 26S proteasome &... | 0.02 | OrthoFinder output from all 47 species | |
Cpa|evm.model.tig00001098.5 | PBA1 | Protein degradation.26S proteasome.20S core... | 0.02 | OrthoFinder output from all 47 species | |
Cre06.g279000 | PBA1 | Protein degradation.26S proteasome.20S core... | 0.04 | OrthoFinder output from all 47 species | |
Cre12.g531100 | PBA1 | Protein degradation.26S proteasome.20S core... | 0.03 | OrthoFinder output from all 47 species | |
Dac_g01306 | PBA1 | beta-type-1 component *(PBA) of 26S proteasome &... | 0.03 | OrthoFinder output from all 47 species | |
Ehy_g04398 | PBA1 | beta-type-1 component *(PBA) of 26S proteasome &... | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os02g53060.1 | PBA1, LOC_Os02g53060 | component beta type-1 of 26S proteasome | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os06g04800.1 | PBA1, LOC_Os06g04800 | component beta type-1 of 26S proteasome | 0.03 | OrthoFinder output from all 47 species | |
Msp_g08337 | PBA1 | beta-type-1 component *(PBA) of 26S proteasome &... | 0.02 | OrthoFinder output from all 47 species | |
Pnu_g02359 | PBA1 | beta-type-1 component *(PBA) of 26S proteasome &... | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0005839 | proteasome core complex | IEA | Interproscan |
BP | GO:0051603 | proteolysis involved in protein catabolic process | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003674 | molecular_function | IEP | HCCA |
MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
MF | GO:0003723 | RNA binding | IEP | HCCA |
MF | GO:0005488 | binding | IEP | HCCA |
MF | GO:0005515 | protein binding | IEP | HCCA |
BP | GO:0006351 | DNA-templated transcription | IEP | HCCA |
BP | GO:0006355 | regulation of DNA-templated transcription | IEP | HCCA |
BP | GO:0009889 | regulation of biosynthetic process | IEP | HCCA |
BP | GO:0010468 | regulation of gene expression | IEP | HCCA |
BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | HCCA |
BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | HCCA |
BP | GO:0019222 | regulation of metabolic process | IEP | HCCA |
MF | GO:0031072 | heat shock protein binding | IEP | HCCA |
BP | GO:0031323 | regulation of cellular metabolic process | IEP | HCCA |
BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | HCCA |
BP | GO:0032774 | RNA biosynthetic process | IEP | HCCA |
BP | GO:0050789 | regulation of biological process | IEP | HCCA |
BP | GO:0050794 | regulation of cellular process | IEP | HCCA |
MF | GO:0051082 | unfolded protein binding | IEP | HCCA |
BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | HCCA |
BP | GO:0051252 | regulation of RNA metabolic process | IEP | HCCA |
BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | HCCA |
BP | GO:0065007 | biological regulation | IEP | HCCA |
BP | GO:0080090 | regulation of primary metabolic process | IEP | HCCA |
MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
BP | GO:0097659 | nucleic acid-templated transcription | IEP | HCCA |
MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | HCCA |
BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR001353 | Proteasome_sua/b | 15 | 195 |
No external refs found! |