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  5. Sam_g07442

Sam_g07442


Description : G-class RAB GTPase & original description: none


Gene families : OG0000865 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000865_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g07442

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00059p00072050 AtRABG3d,... Vesicle trafficking.regulation of membrane tethering and... 0.04 OrthoFinder output from all 47 species
AT1G52280 AtRABG3d, RABG3d RAB GTPase homolog G3D 0.03 OrthoFinder output from all 47 species
Cre06.g311900 ATRAB7, RABG3E, ATRABG3E Vesicle trafficking.regulation of membrane tethering and... 0.01 OrthoFinder output from all 47 species
Dde_g01198 AtRABG3d, RABG3d G-class RAB GTPase & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01013686001 ATRABG3A, RABG3A Vesicle trafficking.regulation of membrane tethering and... 0.04 OrthoFinder output from all 47 species
LOC_Os01g12730.1 AtRABG3d,... G-class RAB GTPase 0.03 OrthoFinder output from all 47 species
LOC_Os05g44050.1 ATRAB7B, RAB7B,... G-class RAB GTPase 0.03 OrthoFinder output from all 47 species
MA_84159g0010 AtRABG3d, RABG3d G-class RAB GTPase 0.02 OrthoFinder output from all 47 species
Pir_g40856 AtRABG3d, RABG3d G-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0125.g021652 ATRABG3C, ATRAB7D, RABG3c G-class RAB GTPase & original description: CDS=113-889 0.02 OrthoFinder output from all 47 species
Solyc01g109520.3.1 ATRAB7B, RAB7B,... G-class RAB GTPase 0.03 OrthoFinder output from all 47 species
Spa_g12567 ATRABG3C, ATRAB7D, RABG3c G-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005743 mitochondrial inner membrane IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
BP GO:0006848 pyruvate transport IEP HCCA
BP GO:0006850 mitochondrial pyruvate transmembrane transport IEP HCCA
MF GO:0015299 obsolete solute:proton antiporter activity IEP HCCA
BP GO:0015711 organic anion transport IEP HCCA
BP GO:0015718 monocarboxylic acid transport IEP HCCA
BP GO:0015849 organic acid transport IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
CC GO:0019866 organelle inner membrane IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
CC GO:0031966 mitochondrial membrane IEP HCCA
BP GO:0046942 carboxylic acid transport IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:1901475 pyruvate transmembrane transport IEP HCCA
BP GO:1903825 organic acid transmembrane transport IEP HCCA
BP GO:1905039 carboxylic acid transmembrane transport IEP HCCA
BP GO:1990542 mitochondrial transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR001806 Small_GTPase 10 177
No external refs found!