Sam_g07305

Description : not classified & original description: none

Gene families : OG0001535 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001535_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Sam_g07305
Cluster	HCCA: Cluster_10

Target	Alias	Description	ECC score	Gene Family Method
Adi_g017751	No alias	component *(eEF1B-gamma) of eEF1B eEF1A-GDP-recycling...	0.07	OrthoFinder output from all 47 species
Adi_g112175	No alias	component *(eEF1B-gamma) of eEF1B eEF1A-GDP-recycling...	0.05	OrthoFinder output from all 47 species
Aev_g32138	No alias	component *(eEF1B-gamma) of eEF1B eEF1A-GDP-recycling...	0.04	OrthoFinder output from all 47 species
Als_g22806	No alias	component *(eEF1B-gamma) of eEF1B eEF1A-GDP-recycling...	0.04	OrthoFinder output from all 47 species
Aob_g06588	No alias	component *(eEF1B-gamma) of eEF1B eEF1A-GDP-recycling...	0.02	OrthoFinder output from all 47 species
Aob_g14268	No alias	component *(eEF1B-gamma) of eEF1B eEF1A-GDP-recycling...	0.05	OrthoFinder output from all 47 species
Aob_g42433	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g11146	No alias	component *(eEF1B-gamma) of eEF1B eEF1A-GDP-recycling...	0.04	OrthoFinder output from all 47 species
Ceric.09G069500.1	Ceric.09G069500	component *(eEF1B-gamma) of eEF1B eEF1A-GDP-recycling...	0.05	OrthoFinder output from all 47 species
Ceric.12G009500.1	Ceric.12G009500	component *(eEF1B-gamma) of eEF1B eEF1A-GDP-recycling...	0.02	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00000829.21	No alias	Protein biosynthesis.translation elongation.eEF1B...	0.02	OrthoFinder output from all 47 species
Dac_g06348	No alias	component *(eEF1B-gamma) of eEF1B eEF1A-GDP-recycling...	0.03	OrthoFinder output from all 47 species
LOC_Os02g12794.3	LOC_Os02g12794	component eEF1B-gamma of eEF1B eEF1A-GDP-recycling complex	0.03	OrthoFinder output from all 47 species
LOC_Os06g37440.1	LOC_Os06g37440	component eEF1B-gamma of eEF1B eEF1A-GDP-recycling complex	0.1	OrthoFinder output from all 47 species
Lfl_g06977	No alias	component *(eEF1B-gamma) of eEF1B eEF1A-GDP-recycling...	0.02	OrthoFinder output from all 47 species
Mp7g04100.1	No alias	component eEF1B-gamma of eEF1B eEF1A-GDP-recycling complex	0.11	OrthoFinder output from all 47 species
Msp_g08318	No alias	component *(eEF1B-gamma) of eEF1B eEF1A-GDP-recycling...	0.05	OrthoFinder output from all 47 species
Msp_g34531	No alias	component *(eEF1B-gamma) of eEF1B eEF1A-GDP-recycling...	0.05	OrthoFinder output from all 47 species
Nbi_g40134	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g05852	No alias	component *(eEF1B-gamma) of eEF1B eEF1A-GDP-recycling...	0.02	OrthoFinder output from all 47 species
Pir_g19670	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g18257	No alias	component *(eEF1B-gamma) of eEF1B eEF1A-GDP-recycling...	0.04	OrthoFinder output from all 47 species
Ppi_g34305	No alias	component *(eEF1B-gamma) of eEF1B eEF1A-GDP-recycling...	0.03	OrthoFinder output from all 47 species
Ppi_g43035	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Sam_g13004	No alias	component *(eEF1B-gamma) of eEF1B eEF1A-GDP-recycling...	0.03	OrthoFinder output from all 47 species
Sam_g32153	No alias	component *(eEF1B-gamma) of eEF1B eEF1A-GDP-recycling...	0.1	OrthoFinder output from all 47 species
Sam_g33826	No alias	component *(eEF1B-gamma) of eEF1B eEF1A-GDP-recycling...	0.06	OrthoFinder output from all 47 species
Sam_g46603	No alias	component *(eEF1B-gamma) of eEF1B eEF1A-GDP-recycling...	0.1	OrthoFinder output from all 47 species
Spa_g08037	No alias	component *(eEF1B-gamma) of eEF1B eEF1A-GDP-recycling...	0.04	OrthoFinder output from all 47 species
Tin_g02785	No alias	component *(eEF1B-gamma) of eEF1B eEF1A-GDP-recycling...	0.09	OrthoFinder output from all 47 species
Zm00001e014465_P001	Zm00001e014465	component eEF1B-gamma of eEF1B eEF1A-GDP-recycling complex	0.05	OrthoFinder output from all 47 species
Zm00001e024937_P001	Zm00001e024937	component eEF1B-gamma of eEF1B eEF1A-GDP-recycling complex	0.05	OrthoFinder output from all 47 species
Zm00001e030647_P003	Zm00001e030647	component eEF1B-gamma of eEF1B eEF1A-GDP-recycling complex	0.04	OrthoFinder output from all 47 species
Zm00001e037277_P002	Zm00001e037277	component eEF1B-gamma of eEF1B eEF1A-GDP-recycling complex	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003746	translation elongation factor activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006414	translational elongation	IEA	Interproscan
MF	GO:0008135	translation factor activity, RNA binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
MF	GO:0045182	translation regulator activity	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0090079	translation regulator activity, nucleic acid binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003735	structural constituent of ribosome	IEP	HCCA
MF	GO:0005198	structural molecule activity	IEP	HCCA
CC	GO:0005575	cellular_component	IEP	HCCA
CC	GO:0005741	mitochondrial outer membrane	IEP	HCCA
CC	GO:0005840	ribosome	IEP	HCCA
BP	GO:0006412	translation	IEP	HCCA
BP	GO:0006518	peptide metabolic process	IEP	HCCA
BP	GO:0006807	nitrogen compound metabolic process	IEP	HCCA
MF	GO:0016614	oxidoreductase activity, acting on CH-OH group of donors	IEP	HCCA
MF	GO:0016616	oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	IEP	HCCA
BP	GO:0019538	protein metabolic process	IEP	HCCA
CC	GO:0019867	outer membrane	IEP	HCCA
CC	GO:0031966	mitochondrial membrane	IEP	HCCA
CC	GO:0031968	organelle outer membrane	IEP	HCCA
BP	GO:0034641	cellular nitrogen compound metabolic process	IEP	HCCA
BP	GO:0043043	peptide biosynthetic process	IEP	HCCA
CC	GO:0043226	organelle	IEP	HCCA
CC	GO:0043228	non-membrane-bounded organelle	IEP	HCCA
CC	GO:0043229	intracellular organelle	IEP	HCCA
CC	GO:0043232	intracellular non-membrane-bounded organelle	IEP	HCCA
BP	GO:0043603	amide metabolic process	IEP	HCCA
BP	GO:0043604	amide biosynthetic process	IEP	HCCA
BP	GO:0044238	primary metabolic process	IEP	HCCA
BP	GO:0044271	cellular nitrogen compound biosynthetic process	IEP	HCCA
BP	GO:0055085	transmembrane transport	IEP	HCCA
CC	GO:0098588	bounding membrane of organelle	IEP	HCCA
CC	GO:0110165	cellular anatomical entity	IEP	HCCA
BP	GO:1901564	organonitrogen compound metabolic process	IEP	HCCA
BP	GO:1901566	organonitrogen compound biosynthetic process	IEP	HCCA
BP	GO:1902600	proton transmembrane transport	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001662	EF1B_G_C	317	422
IPR004046	GST_C	101	190

External Links

No external refs found!

Sam_g07305

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation