Sam_g07141


Description : not classified & original description: none


Gene families : OG0005546 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005546_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g07141
Cluster HCCA: Cluster_146

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00025p00131930 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
Ala_g00956 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g09593 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene01911.t1 CYP40, SQN,... EC_5.2 cis-trans-isomerase & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0158.g053896 No alias not classified & original description: CDS=42-812 0.03 OrthoFinder output from all 47 species
Ceric.1Z008900.1 Ceric.1Z008900 not classified & original description: pacid=50632769... 0.03 OrthoFinder output from all 47 species
LOC_Os07g45300.1 LOC_Os07g45300 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g38502 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g56122 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e035726_P001 Zm00001e035726 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005667 transcription regulator complex IEP HCCA
CC GO:0005672 transcription factor TFIIA complex IEP HCCA
CC GO:0005739 mitochondrion IEP HCCA
CC GO:0005875 microtubule associated complex IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006367 transcription initiation at RNA polymerase II promoter IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
CC GO:0008287 protein serine/threonine phosphatase complex IEP HCCA
MF GO:0008569 minus-end-directed microtubule motor activity IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
MF GO:0019208 phosphatase regulator activity IEP HCCA
MF GO:0019888 protein phosphatase regulator activity IEP HCCA
CC GO:0030286 dynein complex IEP HCCA
CC GO:0030289 protein phosphatase 4 complex IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
CC GO:0090575 RNA polymerase II transcription regulator complex IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1903293 phosphatase complex IEP HCCA
InterPro domains Description Start Stop
IPR007379 Tim44-like_dom 211 363
No external refs found!