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  5. Sam_g07020

Sam_g07020


Description : not classified & original description: none


Gene families : OG0002889 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002889_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g07020

Target Alias Description ECC score Gene Family Method Actions
Adi_g052232 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g49491 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g00730 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0026.g023399 No alias not classified & original description: CDS=135-2003 0.03 OrthoFinder output from all 47 species
Cba_g08553 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.23G052400.1 Ceric.23G052400 not classified & original description: pacid=50610225... 0.05 OrthoFinder output from all 47 species
Ceric.32G057300.1 Ceric.32G057300 not classified & original description: pacid=50597506... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001258.10 No alias No description available 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020723.8 No alias No description available 0.03 OrthoFinder output from all 47 species
Dac_g12181 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g10069 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g14193 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g23170 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g05426 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_10428345g0020 No alias Prolycopene isomerase, chloroplastic OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
MA_10428660g0010 No alias Prolycopene isomerase 1, chloroplastic OS=Oncidium... 0.02 OrthoFinder output from all 47 species
Pir_g17700 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g10834 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g62907 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0052.g014061 No alias not classified & original description: CDS=115-1746 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0128.g021866 No alias not classified & original description: CDS=168-1886 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0204.g025671 No alias not classified & original description: CDS=41-1720 0.05 OrthoFinder output from all 47 species
Smo229587 No alias Prolycopene isomerase 1, chloroplastic OS=Oncidium... 0.04 OrthoFinder output from all 47 species
Spa_g07332 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e011669_P002 Zm00001e011669 Prolycopene isomerase, chloroplastic OS=Daucus carota... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016491 oxidoreductase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0005542 folic acid binding IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0006720 isoprenoid metabolic process IEP HCCA
BP GO:0008299 isoprenoid biosynthetic process IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
BP GO:0010257 NADH dehydrogenase complex assembly IEP HCCA
BP GO:0010258 NADH dehydrogenase complex (plastoquinone) assembly IEP HCCA
BP GO:0010275 NAD(P)H dehydrogenase complex assembly IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0031406 carboxylic acid binding IEP HCCA
MF GO:0033218 amide binding IEP HCCA
MF GO:0043177 organic acid binding IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
MF GO:0050661 NADP binding IEP HCCA
MF GO:0072341 modified amino acid binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR002937 Amino_oxidase 53 542
No external refs found!