Cpa|evm.model.tig00020904.93


No description available


Gene families : OG_01_0000080 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000080_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00020904.93
Cluster HCCA: Cluster_196

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00057p00141830 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.B3... 0.01 Archaeplastida
AMTR_s00155p00082980 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.B3... 0.01 Archaeplastida
GSVIVT01023149001 No alias RNA biosynthesis.transcriptional activation.B3... 0.02 Archaeplastida
Gb_18738 No alias transcription factor (ARF) 0.01 Archaeplastida
Gb_23186 No alias transcription factor (ARF) 0.01 Archaeplastida
Gb_25606 No alias transcription factor (ARF) 0.03 Archaeplastida
MA_10432349g0010 No alias transcription factor (ARF) 0.01 Archaeplastida
MA_122218g0010 No alias transcription factor (ARF) 0.02 Archaeplastida
Pp3c26_11550V3.1 No alias auxin response factor 6 0.02 Archaeplastida
Pp3c5_9420V3.1 No alias auxin response factor 2 0.01 Archaeplastida
Solyc02g077560.3.1 No alias transcription factor (ARF) 0.01 Archaeplastida
Solyc11g013480.3.1 No alias transcription factor (ARF) 0.01 Archaeplastida
Zm00001e018761_P001 No alias transcription factor (ARF) 0.01 Archaeplastida
Zm00001e039552_P004 No alias transcription factor (ARF) 0.01 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR010525 Auxin_resp 78 146
IPR001487 Bromodomain 206 284
No external refs found!