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  5. AMTR_s00029p00022290

AMTR_s00029p00022290 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00029.5

Description : Transcription factor SRM1 OS=Arabidopsis thaliana


Gene families : OG_01_0000067 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000067_tree ,
OG_02_0000498 (LandPlants) Phylogenetic Tree(s): OG_02_0000498_tree ,
OG_03_0000376 (SeedPlants) Phylogenetic Tree(s): OG_03_0000376_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00029p00022290
Cluster HCCA: Cluster_232

Target Alias Description ECC score Gene Family Method Actions
AT2G38090 No alias Duplicated homeodomain-like superfamily protein 0.03 Archaeplastida
AT5G05790 No alias Duplicated homeodomain-like superfamily protein 0.04 Archaeplastida
Cre10.g430750 No alias RNA biosynthesis.transcriptional activation.MYB... 0.01 Archaeplastida
GSVIVT01005816001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
GSVIVT01007843001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.01 Archaeplastida
GSVIVT01034001001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01035363001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
Gb_28483 No alias transcription factor (MYB-related) 0.03 Archaeplastida
LOC_Os01g04930.1 No alias transcription factor (MYB-related) 0.04 Archaeplastida
LOC_Os01g41900.1 No alias transcription factor (MYB-related) 0.02 Archaeplastida
LOC_Os01g63460.1 No alias transcription factor (MYB-related) 0.04 Archaeplastida
LOC_Os05g37730.1 No alias transcription factor (MYB-related) 0.03 Archaeplastida
LOC_Os08g05510.1 No alias transcription factor (MYB-related) 0.01 Archaeplastida
MA_10432538g0010 No alias transcription factor (MYB-related) 0.02 Archaeplastida
MA_16729g0010 No alias transcription factor (MYB-related) 0.02 Archaeplastida
MA_413315g0010 No alias transcription factor (MYB-related) 0.02 Archaeplastida
MA_7049680g0010 No alias no hits & (original description: none) 0.01 Archaeplastida
MA_957399g0010 No alias transcription factor (MYB-related) 0.02 Archaeplastida
Pp3c15_23110V3.1 No alias myb-like transcription factor family protein 0.02 Archaeplastida
Pp3c26_6730V3.1 No alias Duplicated homeodomain-like superfamily protein 0.02 Archaeplastida
Smo84280 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
Solyc03g096350.3.1 No alias transcription factor (MYB-related) 0.03 Archaeplastida
Solyc03g119740.3.1 No alias transcription factor (MYB-related) 0.01 Archaeplastida
Solyc06g076770.3.1 No alias transcription factor (MYB-related) 0.02 Archaeplastida
Solyc07g026680.2.1 No alias transcription factor (MYB-related) 0.03 Archaeplastida
Solyc09g014250.3.1 No alias transcription factor (MYB-related) 0.03 Archaeplastida
Zm00001e002313_P001 No alias transcription factor (MYB-related) 0.02 Archaeplastida
Zm00001e025784_P001 No alias transcription factor (MYB-related) 0.04 Archaeplastida
Zm00001e032519_P001 No alias transcription factor (MYB-related) 0.03 Archaeplastida
Zm00001e037865_P001 No alias transcription factor (MYB-related) 0.03 Archaeplastida
AT2G38090 No alias Duplicated homeodomain-like superfamily protein 0.02 LandPlants
AT5G05790 No alias Duplicated homeodomain-like superfamily protein 0.02 LandPlants
GSVIVT01036090001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 LandPlants
Gb_28483 No alias transcription factor (MYB-related) 0.03 LandPlants
LOC_Os01g04930.1 No alias transcription factor (MYB-related) 0.03 LandPlants
LOC_Os01g63460.1 No alias transcription factor (MYB-related) 0.04 LandPlants
LOC_Os05g37730.1 No alias transcription factor (MYB-related) 0.03 LandPlants
Pp3c26_6730V3.1 No alias Duplicated homeodomain-like superfamily protein 0.02 LandPlants
Solyc03g096350.3.1 No alias transcription factor (MYB-related) 0.02 LandPlants
Solyc03g119740.3.1 No alias transcription factor (MYB-related) 0.01 LandPlants
Solyc05g052610.3.1 No alias transcription factor (MYB-related) 0.02 LandPlants
Solyc06g076770.3.1 No alias transcription factor (MYB-related) 0.02 LandPlants
Solyc09g014250.3.1 No alias transcription factor (MYB-related) 0.02 LandPlants
Zm00001e025784_P001 No alias transcription factor (MYB-related) 0.03 LandPlants
AT5G05790 No alias Duplicated homeodomain-like superfamily protein 0.01 SeedPlants
Gb_28483 No alias transcription factor (MYB-related) 0.03 SeedPlants
LOC_Os01g63460.1 No alias transcription factor (MYB-related) 0.03 SeedPlants
LOC_Os05g37730.1 No alias transcription factor (MYB-related) 0.02 SeedPlants
Solyc03g119740.3.1 No alias transcription factor (MYB-related) 0.01 SeedPlants
Solyc05g052610.3.1 No alias transcription factor (MYB-related) 0.02 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

No InterPro domains available for this sequence

No external refs found!