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  5. Sam_g06702

Sam_g06702


Description : not classified & original description: none


Gene families : OG0000190 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000190_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g06702

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00069p00082650 evm_27.TU.AmTr_v1... Short-chain dehydrogenase TIC 32, chloroplastic... 0.02 OrthoFinder output from all 47 species
AMTR_s00085p00054430 evm_27.TU.AmTr_v1... Short-chain dehydrogenase TIC 32, chloroplastic... 0.04 OrthoFinder output from all 47 species
AT1G64590 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.02 OrthoFinder output from all 47 species
AT5G50130 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g077005 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g37903 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g07973 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g04800 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g23934 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g44591 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g44592 No alias component *(Tic32) of inner envelope TIC translocation... 0.03 OrthoFinder output from all 47 species
Aob_g23987 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene24650.t1 Aspi01Gene24650 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene24651.t1 Aspi01Gene24651 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene56850.t1 Aspi01Gene56850 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene63378.t1 Aspi01Gene63378 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene63379.t1 Aspi01Gene63379 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene63380.t1 Aspi01Gene63380 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0419.g069131 No alias not classified & original description: CDS=35-1039 0.03 OrthoFinder output from all 47 species
Cba_g15855 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.07G007800.1 Ceric.07G007800 not classified & original description: pacid=50627820... 0.02 OrthoFinder output from all 47 species
Ceric.11G038900.1 Ceric.11G038900 not classified & original description: pacid=50595966... 0.03 OrthoFinder output from all 47 species
Ceric.11G063200.1 Ceric.11G063200 not classified & original description: pacid=50595578... 0.02 OrthoFinder output from all 47 species
Ceric.29G049900.1 Ceric.29G049900 not classified & original description: pacid=50625713... 0.02 OrthoFinder output from all 47 species
Ceric.32G064100.1 Ceric.32G064100 not classified & original description: pacid=50598429... 0.03 OrthoFinder output from all 47 species
Cre09.g398252 No alias Short-chain dehydrogenase TIC 32, chloroplastic... 0.02 OrthoFinder output from all 47 species
Dcu_g46056 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g07148 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g24464 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g08914 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g06287 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g07381 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0041.g012608 No alias not classified & original description: CDS=342-1457 0.03 OrthoFinder output from all 47 species
Sam_g48884 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo420551 No alias Short-chain dehydrogenase TIC 32, chloroplastic OS=Pisum sativum 0.02 OrthoFinder output from all 47 species
Solyc09g010510.4.1 Solyc09g010510 Short-chain dehydrogenase TIC 32, chloroplastic OS=Pisum... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004097 catechol oxidase activity IEP HCCA
MF GO:0004497 monooxygenase activity IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005984 disaccharide metabolic process IEP HCCA
BP GO:0005991 trehalose metabolic process IEP HCCA
BP GO:0005992 trehalose biosynthetic process IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
BP GO:0009311 oligosaccharide metabolic process IEP HCCA
BP GO:0009312 oligosaccharide biosynthetic process IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP HCCA
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP HCCA
MF GO:0016840 carbon-nitrogen lyase activity IEP HCCA
MF GO:0016843 amine-lyase activity IEP HCCA
MF GO:0016844 strictosidine synthase activity IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0046351 disaccharide biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR002347 SDR_fam 120 261
No external refs found!