Aliases : ATHSF1, HSF1, HSFA1A, ATHSFA1A
Description : HSF-type transcription factor & original description: none
Gene families : OG0000093 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000093_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Lfl_g26028 | |
Cluster | HCCA: Cluster_7 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Ala_g01284 | HSFB4, SCZ, AT-HSFB4 | HSF-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Aob_g32376 | HSFB4, SCZ, AT-HSFB4 | HSF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Azfi_s0672.g081792 | HSF4, HSFB1,... | HSF-type transcription factor & original description: CDS=1-651 | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01033257001 | AT-HSFB3, HSFB3 | RNA biosynthesis.transcriptional activation.HSF (heat... | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os09g28200.1 | HSFB4, SCZ,... | transcription factor (HSF) | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os10g28340.1 | AT-HSFA6B,... | transcription factor (HSF) | 0.02 | OrthoFinder output from all 47 species | |
MA_113508g0010 | HSFB4, SCZ, AT-HSFB4 | transcription factor (HSF) | 0.03 | OrthoFinder output from all 47 species | |
MA_13910g0010 | HSFB4, SCZ, AT-HSFB4 | transcription factor (HSF) | 0.04 | OrthoFinder output from all 47 species | |
MA_29913g0010 | AT-HSFA6B, HSFA6B | transcription factor (HSF). transcriptional regulator (HsfA1) | 0.01 | OrthoFinder output from all 47 species | |
Ppi_g07494 | AT-HSFA6B, HSFA6B | HSF-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0001.g000353 | HSFA1E, ATHSFA1E | HSF-type transcription factor & original description:... | 0.03 | OrthoFinder output from all 47 species | |
Smo93081 | ATHSFA1D, HSFA1D | RNA biosynthesis.transcriptional activation.HSF (heat... | 0.02 | OrthoFinder output from all 47 species | |
Solyc12g007070.2.1 | AT-HSFC1, HSFC1,... | transcription factor (HSF) | 0.01 | OrthoFinder output from all 47 species | |
Zm00001e032930_P002 | AT-HSFA6B,... | transcription factor (HSF) | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003700 | DNA-binding transcription factor activity | IEA | Interproscan |
BP | GO:0006355 | regulation of DNA-templated transcription | IEA | Interproscan |
MF | GO:0043565 | sequence-specific DNA binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0005507 | copper ion binding | IEP | HCCA |
BP | GO:0006952 | defense response | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR000232 | HSF_DNA-bd | 141 | 230 |
No external refs found! |