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  5. Sam_g06555

Sam_g06555


Description : subfamily ABCG transporter & original description: none


Gene families : OG0000438 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000438_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g06555

Target Alias Description ECC score Gene Family Method Actions
Als_g18794 No alias subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene10921.t1 Aspi01Gene10921 subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene71266.t1 Aspi01Gene71266 subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g17387 No alias subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.34G074000.1 Ceric.34G074000 not classified & original description: pacid=50622980... 0.02 OrthoFinder output from all 47 species
Len_g37001 No alias subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
MA_18507g0010 ABCG14 cytokinin transporter (ABCG14). subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species
Msp_g14978 No alias subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e040163_P001 ABCG14, Zm00001e040163 cytokinin transporter (ABCG14). subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
MF GO:0140359 ABC-type transporter activity IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005576 extracellular region IEP HCCA
CC GO:0005618 cell wall IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP HCCA
CC GO:0030312 external encapsulating structure IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
CC GO:0048046 apoplast IEP HCCA
InterPro domains Description Start Stop
IPR043926 ABCG_dom 278 337
IPR003439 ABC_transporter-like_ATP-bd 98 250
IPR013525 ABC_2_trans 396 599
No external refs found!