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  5. Sam_g06488

Sam_g06488


Description : subcluster B phosphatase & original description: none


Gene families : OG0000687 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000687_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g06488
Cluster HCCA: Cluster_141

Target Alias Description ECC score Gene Family Method Actions
AT5G11860 SSP5 SCP1-like small phosphatase 5 0.03 OrthoFinder output from all 47 species
AT5G46410 SSP4 SCP1-like small phosphatase 4 0.04 OrthoFinder output from all 47 species
Ceric.27G014300.1 SSP5, Ceric.27G014300 subcluster B phosphatase & original description:... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020553.172 SSP5 Protein modification.dephosphorylation.aspartate-based... 0.01 OrthoFinder output from all 47 species
Dcu_g14123 SSP5 subcluster B phosphatase & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01001951001 SSP4b Protein modification.dephosphorylation.aspartate-based... 0.03 OrthoFinder output from all 47 species
GSVIVT01010477001 SSP5 Protein modification.dephosphorylation.aspartate-based... 0.02 OrthoFinder output from all 47 species
LOC_Os07g10690.1 SSP5, LOC_Os07g10690 RNA polymerase-II phosphatase. subcluster B phosphatase 0.02 OrthoFinder output from all 47 species
Smo126751 SSP5 Protein modification.dephosphorylation.aspartate-based... 0.02 OrthoFinder output from all 47 species
Solyc02g071250.3.1 SSP4, Solyc02g071250 RNA polymerase-II phosphatase. subcluster B phosphatase 0.04 OrthoFinder output from all 47 species
Zm00001e040451_P004 SSP5, Zm00001e040451 RNA polymerase-II phosphatase. subcluster B phosphatase 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000030 mannosyltransferase activity IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004527 exonuclease activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005667 transcription regulator complex IEP HCCA
MF GO:0008408 3'-5' exonuclease activity IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR004274 FCP1_dom 450 610
No external refs found!