Sam_g06485

Description : component *(SRP54) of SRP (signal recognition particle) complex & original description: none

Gene families : OG0003514 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003514_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Sam_g06485

Target	Alias	Description	ECC score	Gene Family Method
Cre13.g569200	No alias	Protein translocation.endoplasmic...	0.02	OrthoFinder output from all 47 species
GSVIVT01017362001	No alias	Protein translocation.endoplasmic...	0.02	OrthoFinder output from all 47 species
Pir_g57198	No alias	component *(SRP54) of SRP (signal recognition particle)...	0.03	OrthoFinder output from all 47 species
Ppi_g03018	No alias	component *(SRP54) of SRP (signal recognition particle)...	0.03	OrthoFinder output from all 47 species
Spa_g11832	No alias	component *(SRP54) of SRP (signal recognition particle)...	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005525	GTP binding	IEA	Interproscan
BP	GO:0006605	protein targeting	None	Extended
BP	GO:0006612	protein targeting to membrane	None	Extended
BP	GO:0006613	cotranslational protein targeting to membrane	None	Extended
BP	GO:0006614	SRP-dependent cotranslational protein targeting to membrane	IEA	Interproscan
BP	GO:0006810	transport	None	Extended
BP	GO:0006886	intracellular protein transport	None	Extended
BP	GO:0008104	protein localization	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015031	protein transport	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0019001	guanyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032561	guanyl ribonucleotide binding	None	Extended
BP	GO:0033036	macromolecule localization	None	Extended
BP	GO:0033365	protein localization to organelle	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0045047	protein targeting to ER	None	Extended
BP	GO:0045184	establishment of protein localization	None	Extended
BP	GO:0046907	intracellular transport	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051649	establishment of localization in cell	None	Extended
BP	GO:0051668	localization within membrane	None	Extended
BP	GO:0070727	cellular macromolecule localization	None	Extended
BP	GO:0070972	protein localization to endoplasmic reticulum	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended
BP	GO:0072594	establishment of protein localization to organelle	None	Extended
BP	GO:0072599	establishment of protein localization to endoplasmic reticulum	None	Extended
BP	GO:0072657	protein localization to membrane	None	Extended
BP	GO:0090150	establishment of protein localization to membrane	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0005750	mitochondrial respiratory chain complex III	IEP	HCCA
BP	GO:0006091	generation of precursor metabolites and energy	IEP	HCCA
BP	GO:0006122	mitochondrial electron transport, ubiquinol to cytochrome c	IEP	HCCA
BP	GO:0009060	aerobic respiration	IEP	HCCA
BP	GO:0015980	energy derivation by oxidation of organic compounds	IEP	HCCA
BP	GO:0016192	vesicle-mediated transport	IEP	HCCA
BP	GO:0019646	aerobic electron transport chain	IEP	HCCA
BP	GO:0022900	electron transport chain	IEP	HCCA
BP	GO:0022904	respiratory electron transport chain	IEP	HCCA
CC	GO:0045275	respiratory chain complex III	IEP	HCCA
BP	GO:0045333	cellular respiration	IEP	HCCA
CC	GO:0070069	cytochrome complex	IEP	HCCA
CC	GO:0098796	membrane protein complex	IEP	HCCA
CC	GO:0098798	mitochondrial protein-containing complex	IEP	HCCA
CC	GO:0098800	inner mitochondrial membrane protein complex	IEP	HCCA
CC	GO:0098803	respiratory chain complex	IEP	HCCA
CC	GO:1902494	catalytic complex	IEP	HCCA
CC	GO:1902495	transmembrane transporter complex	IEP	HCCA
CC	GO:1990204	oxidoreductase complex	IEP	HCCA
CC	GO:1990351	transporter complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR013822	Signal_recog_particl_SRP54_hlx	6	83
IPR004125	Signal_recog_particle_SRP54_M	328	429
IPR000897	SRP54_GTPase_dom	102	296

External Links

No external refs found!

Sam_g06485

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation