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  5. Sam_g06480

Sam_g06480


Description : solute transporter *(NAT) & original description: none


Gene families : OG0000475 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000475_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g06480
Cluster HCCA: Cluster_11

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00065p00152120 NAT7, ATNAT7,... Solute transport.carrier-mediated transport.APC... 0.02 OrthoFinder output from all 47 species
AMTR_s00130p00100230 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.APC... 0.02 OrthoFinder output from all 47 species
AT1G10540 NAT8, ATNAT8 nucleobase-ascorbate transporter 8 0.02 OrthoFinder output from all 47 species
AT2G05760 No alias Xanthine/uracil permease family protein 0.03 OrthoFinder output from all 47 species
AT5G62890 No alias Xanthine/uracil permease family protein 0.04 OrthoFinder output from all 47 species
Adi_g025465 No alias solute transporter *(NAT) & original description: none 0.07 OrthoFinder output from all 47 species
Aev_g32980 No alias solute transporter *(NAT) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g25211 No alias solute transporter *(NAT) & original description: none 0.05 OrthoFinder output from all 47 species
Als_g00933 No alias solute transporter *(NAT) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g09971 No alias solute transporter *(NAT) & original description: none 0.07 OrthoFinder output from all 47 species
Aop_g03822 No alias solute transporter *(NAT) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g08308 No alias solute transporter *(NAT) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g12772 No alias solute transporter *(NAT) & original description: none 0.1 OrthoFinder output from all 47 species
Aspi01Gene49672.t1 Aspi01Gene49672 solute transporter *(NAT) & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g16647 No alias solute transporter *(NAT) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.09G071100.1 Ceric.09G071100 solute transporter *(NAT) & original description:... 0.02 OrthoFinder output from all 47 species
Dac_g05724 No alias solute transporter *(NAT) & original description: none 0.08 OrthoFinder output from all 47 species
Dac_g14848 No alias solute transporter *(NAT) & original description: none 0.12 OrthoFinder output from all 47 species
Dcu_g02884 No alias solute transporter *(NAT) & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g12691 No alias solute transporter *(NAT) & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g24459 No alias solute transporter *(NAT) & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01007809001 No alias Solute transport.carrier-mediated transport.APC... 0.03 OrthoFinder output from all 47 species
GSVIVT01030497001 No alias Solute transport.carrier-mediated transport.APC... 0.03 OrthoFinder output from all 47 species
LOC_Os01g55500.1 LOC_Os01g55500 solute transporter (NAT) 0.03 OrthoFinder output from all 47 species
LOC_Os02g50820.1 LOC_Os02g50820 solute transporter (NAT) 0.02 OrthoFinder output from all 47 species
LOC_Os08g32500.1 LOC_Os08g32500 solute transporter (NAT) 0.04 OrthoFinder output from all 47 species
LOC_Os09g15170.1 LOC_Os09g15170 solute transporter (NAT) 0.02 OrthoFinder output from all 47 species
Len_g00677 No alias solute transporter *(NAT) & original description: none 0.06 OrthoFinder output from all 47 species
Len_g10406 No alias solute transporter *(NAT) & original description: none 0.02 OrthoFinder output from all 47 species
Len_g19983 NAT7, ATNAT7 solute transporter *(NAT) & original description: none 0.03 OrthoFinder output from all 47 species
Len_g24186 No alias solute transporter *(NAT) & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g03235 No alias solute transporter *(NAT) & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g18801 No alias solute transporter *(NAT) & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g28268 No alias solute transporter *(NAT) & original description: none 0.02 OrthoFinder output from all 47 species
MA_124630g0010 No alias solute transporter (NAT) 0.02 OrthoFinder output from all 47 species
Mp8g05640.1 No alias solute transporter (NAT) 0.01 OrthoFinder output from all 47 species
Mp8g07270.1 No alias solute transporter (NAT) 0.02 OrthoFinder output from all 47 species
Mp8g07280.1 No alias solute transporter (NAT) 0.02 OrthoFinder output from all 47 species
Msp_g03175 No alias solute transporter *(NAT) & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g03973 No alias solute transporter *(NAT) & original description: none 0.09 OrthoFinder output from all 47 species
Msp_g30058 No alias solute transporter *(NAT) & original description: none 0.15 OrthoFinder output from all 47 species
Nbi_g05350 No alias solute transporter *(NAT) & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g07259 No alias solute transporter *(NAT) & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g07136 No alias solute transporter *(NAT) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g02988 No alias solute transporter *(NAT) & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g03023 No alias solute transporter *(NAT) & original description: none 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0198.g025539 No alias solute transporter *(NAT) & original description: CDS=487-2046 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0206.g025746 No alias solute transporter *(NAT) & original description: CDS=1208-2422 0.02 OrthoFinder output from all 47 species
Sam_g09619 No alias solute transporter *(NAT) & original description: none 0.05 OrthoFinder output from all 47 species
Smo185282 No alias Solute transport.carrier-mediated transport.APC... 0.04 OrthoFinder output from all 47 species
Smo73581 No alias Solute transport.carrier-mediated transport.APC... 0.05 OrthoFinder output from all 47 species
Solyc02g072500.3.1 Solyc02g072500 solute transporter (NAT) 0.05 OrthoFinder output from all 47 species
Solyc03g114030.3.1 Solyc03g114030 solute transporter (NAT) 0.03 OrthoFinder output from all 47 species
Solyc05g006020.3.1 NAT7, ATNAT7,... solute transporter (NAT) 0.02 OrthoFinder output from all 47 species
Solyc06g071330.4.1 Solyc06g071330 solute transporter (NAT) 0.04 OrthoFinder output from all 47 species
Solyc07g049320.4.1 Solyc07g049320 solute transporter (NAT) 0.04 OrthoFinder output from all 47 species
Spa_g04707 No alias solute transporter *(NAT) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g05688 No alias solute transporter *(NAT) & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g07450 No alias solute transporter *(NAT) & original description: none 0.08 OrthoFinder output from all 47 species
Tin_g02025 No alias solute transporter *(NAT) & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g04574 No alias solute transporter *(NAT) & original description: none 0.11 OrthoFinder output from all 47 species
Tin_g06570 No alias solute transporter *(NAT) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e004232_P002 Zm00001e004232 solute transporter (NAT) 0.02 OrthoFinder output from all 47 species
Zm00001e009683_P001 Zm00001e009683 solute transporter (NAT) 0.03 OrthoFinder output from all 47 species
Zm00001e021544_P001 Zm00001e021544 solute transporter (NAT) 0.02 OrthoFinder output from all 47 species
Zm00001e029011_P005 Zm00001e029011 solute transporter (NAT) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
MF GO:0022857 transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0003896 DNA primase activity IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006269 DNA replication, synthesis of RNA primer IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
BP GO:0032392 DNA geometric change IEP HCCA
BP GO:0032508 DNA duplex unwinding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR006043 NCS2 41 444
No external refs found!