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  5. Sam_g06463

Sam_g06463


Description : not classified & original description: none


Gene families : OG0000217 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000217_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g06463

Target Alias Description ECC score Gene Family Method Actions
AT5G03230 No alias Protein of unknown function, DUF584 0.02 OrthoFinder output from all 47 species
Ala_g01505 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g01567 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g05948 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene26692.t1 Aspi01Gene26692 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene40683.t1 Aspi01Gene40683 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene40684.t1 Aspi01Gene40684 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g32474 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g28448 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g06635 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g48442 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc02g032800.1.1 Solyc02g032800 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Solyc09g007790.1.1 Solyc09g007790 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000105 histidine biosynthetic process IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003879 ATP phosphoribosyltransferase activity IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006072 glycerol-3-phosphate metabolic process IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006547 histidine metabolic process IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008173 RNA methyltransferase activity IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0016763 pentosyltransferase activity IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0046168 glycerol-3-phosphate catabolic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:0046434 organophosphate catabolic process IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
BP GO:0052646 alditol phosphate metabolic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:1901136 carbohydrate derivative catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR007608 Senescence_reg_S40 48 263
No external refs found!