Sam_g06269


Description : not classified & original description: none


Gene families : OG0006644 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006644_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g06269
Cluster HCCA: Cluster_115

Target Alias Description ECC score Gene Family Method Actions
AT3G04650 No alias FAD/NAD(P)-binding oxidoreductase family protein 0.03 OrthoFinder output from all 47 species
Ala_g12977 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g09005 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ceric.24G000600.1 Ceric.24G000600 not classified & original description: pacid=50629566... 0.07 OrthoFinder output from all 47 species
Dcu_g04006 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g29463 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Gb_11480 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os12g40540.1 LOC_Os12g40540 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Len_g22574 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g30083 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Mp8g15460.1 No alias no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Ore_g06378 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g12528 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g08446 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0034.g011288 No alias not classified & original description: CDS=168-1793 0.05 OrthoFinder output from all 47 species
Solyc01g097160.3.1 Solyc01g097160 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e003142_P002 Zm00001e003142 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0000105 histidine biosynthetic process IEP HCCA
MF GO:0004424 imidazoleglycerol-phosphate dehydratase activity IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006547 histidine metabolic process IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016743 carboxyl- or carbamoyltransferase activity IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016836 hydro-lyase activity IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!