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  5. Sam_g06213

Sam_g06213


Description : not classified & original description: none


Gene families : OG0001176 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001176_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g06213

Target Alias Description ECC score Gene Family Method Actions
Len_g10513 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g53692 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0007.g003746 No alias not classified & original description: CDS=1-333 0.02 OrthoFinder output from all 47 species
Sam_g00899 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Sam_g00935 No alias RGF precursor polypeptide & original description: none 0.06 OrthoFinder output from all 47 species
Sam_g01060 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g01178 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g01283 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g01309 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g02833 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g03222 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g04740 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Sam_g07200 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Sam_g10610 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g14822 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g17393 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Sam_g18801 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g20558 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g21249 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g21603 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g25195 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Sam_g25698 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g29005 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g37055 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Sam_g37771 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g40133 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g44226 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g44593 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g49238 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Sam_g52335 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0008134 transcription factor binding IEP HCCA
MF GO:0017025 TBP-class protein binding IEP HCCA
MF GO:0140296 general transcription initiation factor binding IEP HCCA
InterPro domains Description Start Stop
IPR005162 Retrotrans_gag_dom 46 127
No external refs found!