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  5. Sam_g06209

Sam_g06209


Description : autophagosome ubiquitin-fold protein *(ATG8) & original description: none


Gene families : OG0000801 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000801_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g06209

Target Alias Description ECC score Gene Family Method Actions
Adi_g014046 ATG8F autophagosome ubiquitin-fold protein *(ATG8) & original... 0.02 OrthoFinder output from all 47 species
Adi_g016835 ATG8F autophagosome ubiquitin-fold protein *(ATG8) & original... 0.02 OrthoFinder output from all 47 species
Dde_g01928 ATG8F autophagosome ubiquitin-fold protein *(ATG8) & original... 0.03 OrthoFinder output from all 47 species
Ehy_g17725 ATG8A, APG8A autophagosome ubiquitin-fold protein *(ATG8) & original... 0.02 OrthoFinder output from all 47 species
LOC_Os07g32800.2 ATG8C, LOC_Os07g32800 ATG8 autophagosome ubiquitin-fold protein 0.02 OrthoFinder output from all 47 species
Msp_g25613 ATG8E, ATATG8E autophagosome ubiquitin-fold protein *(ATG8) & original... 0.03 OrthoFinder output from all 47 species
Nbi_g05523 ATG8F autophagosome ubiquitin-fold protein *(ATG8) & original... 0.02 OrthoFinder output from all 47 species
Ppi_g43212 ATG8F autophagosome ubiquitin-fold protein *(ATG8) & original... 0.02 OrthoFinder output from all 47 species
Zm00001e006887_P001 ATG8C, Zm00001e006887 ATG8 autophagosome ubiquitin-fold protein 0.03 OrthoFinder output from all 47 species
Zm00001e021618_P001 ATG8C, Zm00001e021618 ATG8 autophagosome ubiquitin-fold protein 0.02 OrthoFinder output from all 47 species
Zm00001e041680_P001 ATG8C, Zm00001e041680 ATG8 autophagosome ubiquitin-fold protein 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
InterPro domains Description Start Stop
IPR004241 Atg8-like 15 118
No external refs found!