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  5. Sam_g06190

Sam_g06190


Description : not classified & original description: none


Gene families : OG0005834 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005834_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g06190

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00008p00118590 evm_27.TU.AmTr_v1... Probable plastid-lipid-associated protein 4,... 0.03 OrthoFinder output from all 47 species
Aev_g10400 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g15037 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g04164 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g22462 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene57224.t1 Aspi01Gene57224 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0245.g059935 No alias not classified & original description: CDS=43-876 0.03 OrthoFinder output from all 47 species
Ceric.28G040000.1 Ceric.28G040000 not classified & original description: pacid=50570971... 0.06 OrthoFinder output from all 47 species
Cre03.g188650 No alias Probable plastid-lipid-associated protein 4,... 0.01 OrthoFinder output from all 47 species
Dcu_g42345 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01022998001 No alias Probable plastid-lipid-associated protein 4,... 0.02 OrthoFinder output from all 47 species
LOC_Os03g49720.1 LOC_Os03g49720 Probable plastid-lipid-associated protein 4,... 0.03 OrthoFinder output from all 47 species
Lfl_g00639 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g12464 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g02685 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g01288 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g52172 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo85410 No alias Probable plastid-lipid-associated protein 4,... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003887 DNA-directed DNA polymerase activity IEP HCCA
MF GO:0004721 phosphoprotein phosphatase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0008037 cell recognition IEP HCCA
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP HCCA
BP GO:0008150 biological_process IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0010257 NADH dehydrogenase complex assembly IEP HCCA
BP GO:0010258 NADH dehydrogenase complex (plastoquinone) assembly IEP HCCA
BP GO:0010275 NAD(P)H dehydrogenase complex assembly IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
BP GO:0016311 dephosphorylation IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0016782 transferase activity, transferring sulphur-containing groups IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
MF GO:0034061 DNA polymerase activity IEP HCCA
MF GO:0035596 methylthiotransferase activity IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
BP GO:0048544 recognition of pollen IEP HCCA
MF GO:0050497 alkylthioltransferase activity IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051539 4 iron, 4 sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140359 ABC-type transporter activity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR006843 PAP/fibrillin_dom 81 240
No external refs found!