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  5. Sam_g06125

Sam_g06125


Description : scaffold component *(LCAA) of Mg-protoporphyrin IX monomethylester cyclase complex & original description: none


Gene families : OG0006125 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006125_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g06125
Cluster HCCA: Cluster_7

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00077p00179590 evm_27.TU.AmTr_v1... Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll... 0.04 OrthoFinder output from all 47 species
AT5G58250 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.04 OrthoFinder output from all 47 species
Ceric.30G052300.1 Ceric.30G052300 scaffold component *(LCAA) of Mg-protoporphyrin IX... 0.05 OrthoFinder output from all 47 species
Cre12.g490500 No alias Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll... 0.01 OrthoFinder output from all 47 species
Dcu_g18827 No alias scaffold component *(LCAA) of Mg-protoporphyrin IX... 0.06 OrthoFinder output from all 47 species
Dde_g06803 No alias scaffold component *(LCAA) of Mg-protoporphyrin IX... 0.02 OrthoFinder output from all 47 species
Ehy_g15832 No alias scaffold component *(LCAA) of Mg-protoporphyrin IX... 0.02 OrthoFinder output from all 47 species
GSVIVT01024524001 No alias Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll... 0.06 OrthoFinder output from all 47 species
LOC_Os03g21370.1 LOC_Os03g21370 scaffolding component LCAA of Mg-protoporphyrin IX... 0.04 OrthoFinder output from all 47 species
Len_g20674 No alias scaffold component *(LCAA) of Mg-protoporphyrin IX... 0.03 OrthoFinder output from all 47 species
Mp5g08000.1 No alias scaffolding component LCAA of Mg-protoporphyrin IX... 0.06 OrthoFinder output from all 47 species
Msp_g10285 No alias scaffold component *(LCAA) of Mg-protoporphyrin IX... 0.02 OrthoFinder output from all 47 species
Ore_g04898 No alias scaffold component *(LCAA) of Mg-protoporphyrin IX... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0217.g026072 No alias scaffold component *(LCAA) of Mg-protoporphyrin IX... 0.05 OrthoFinder output from all 47 species
Solyc06g007760.4.1 Solyc06g007760 scaffolding component LCAA of Mg-protoporphyrin IX... 0.04 OrthoFinder output from all 47 species
Spa_g16999 No alias scaffold component *(LCAA) of Mg-protoporphyrin IX... 0.03 OrthoFinder output from all 47 species
Zm00001e001556_P001 Zm00001e001556 scaffolding component LCAA of Mg-protoporphyrin IX... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0008883 glutamyl-tRNA reductase activity IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0033013 tetrapyrrole metabolic process IEP HCCA
BP GO:0033014 tetrapyrrole biosynthetic process IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
MF GO:0050661 NADP binding IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR019616 Ycf54 82 170
No external refs found!