Sam_g06100


Description : not classified & original description: none


Gene families : OG0004114 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004114_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g06100

Target Alias Description ECC score Gene Family Method Actions
AT1G06460 ACD31.2, ACD32.1 alpha-crystallin domain 32.1 0.03 OrthoFinder output from all 47 species
Adi_g012521 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g07064 ACD31.2, ACD32.1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g02943 ACD31.2, ACD32.1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g15914 ACD31.2, ACD32.1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.05G035700.1 ACD31.2,... not classified & original description: pacid=50578719... 0.08 OrthoFinder output from all 47 species
GSVIVT01020783001 ACD31.2, ACD32.1 No description available 0.03 OrthoFinder output from all 47 species
Mp2g17070.1 ACD31.2, ACD32.1 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Nbi_g18182 HSP17.6II not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g34141 ACD31.2, ACD32.1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g63068 ACD31.2, ACD32.1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0003.g001629 ACD31.2, ACD32.1 not classified & original description: CDS=1-816 0.02 OrthoFinder output from all 47 species
Smo441564 ACD31.2, ACD32.1 No description available 0.05 OrthoFinder output from all 47 species
Solyc07g055720.4.1 ACD31.2,... no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Spa_g02330 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g40648 ACD31.2, ACD32.1 not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004611 phosphoenolpyruvate carboxykinase activity IEP HCCA
MF GO:0004645 1,4-alpha-oligoglucan phosphorylase activity IEP HCCA
BP GO:0006066 alcohol metabolic process IEP HCCA
BP GO:0006099 tricarboxylic acid cycle IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006766 vitamin metabolic process IEP HCCA
BP GO:0006767 water-soluble vitamin metabolic process IEP HCCA
BP GO:0006772 thiamine metabolic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
MF GO:0008184 glycogen phosphorylase activity IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
MF GO:0008964 phosphoenolpyruvate carboxylase activity IEP HCCA
BP GO:0009110 vitamin biosynthetic process IEP HCCA
BP GO:0009228 thiamine biosynthetic process IEP HCCA
BP GO:0015977 carbon fixation IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0034308 primary alcohol metabolic process IEP HCCA
BP GO:0034309 primary alcohol biosynthetic process IEP HCCA
BP GO:0042364 water-soluble vitamin biosynthetic process IEP HCCA
BP GO:0042723 thiamine-containing compound metabolic process IEP HCCA
BP GO:0042724 thiamine-containing compound biosynthetic process IEP HCCA
BP GO:0044272 sulfur compound biosynthetic process IEP HCCA
BP GO:0046165 alcohol biosynthetic process IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0072527 pyrimidine-containing compound metabolic process IEP HCCA
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
BP GO:1901615 organic hydroxy compound metabolic process IEP HCCA
BP GO:1901617 organic hydroxy compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR002068 A-crystallin/Hsp20_dom 185 283
No external refs found!