Description : floral promoter *(CONSTANS) & original description: none
Gene families : OG0001141 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001141_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Sam_g06078 | |
Cluster | HCCA: Cluster_55 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT5G15850 | COL1, ATCOL1 | CONSTANS-like 1 | 0.02 | OrthoFinder output from all 47 species | |
AT5G57660 | ATCOL5, COL5 | CONSTANS-like 5 | 0.02 | OrthoFinder output from all 47 species | |
Azfi_s0006.g009656 | ATCOL4, COL4 | floral promoter *(CONSTANS) & original description: CDS=186-1232 | 0.02 | OrthoFinder output from all 47 species | |
Ceric.04G058700.1 | ATCOL4, COL4,... | floral promoter *(CONSTANS) & original description:... | 0.02 | OrthoFinder output from all 47 species | |
GSVIVT01036499001 | COL2, ATCOL2 | RNA biosynthesis.transcriptional activation.C2C2... | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os02g08150.1 | ATCOL5, COL5,... | Zinc finger protein CONSTANS-LIKE 5 OS=Arabidopsis... | 0.05 | OrthoFinder output from all 47 species | |
LOC_Os04g42020.1 | ATCOL5, COL5,... | transcription factor (BBX-CO) | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os09g06464.1 | COL2, ATCOL2,... | Zinc finger protein CO3 OS=Oryza sativa subsp. japonica... | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os10g41100.1 | ATCOL5, COL5,... | Transcription factor GHD7 OS=Oryza sativa subsp.... | 0.02 | OrthoFinder output from all 47 species | |
Lfl_g05304 | ATCOL4, COL4 | floral promoter *(CONSTANS) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Smo185898 | ATCOL4, COL4 | RNA biosynthesis.transcriptional activation.C2C2... | 0.03 | OrthoFinder output from all 47 species | |
Spa_g06394 | ATCOL4, COL4 | floral promoter *(CONSTANS) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e041152_P001 | ATCOL5, COL5,... | transcription factor (BBX-CO) | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0005515 | protein binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004096 | catalase activity | IEP | HCCA |
MF | GO:0004375 | glycine dehydrogenase (decarboxylating) activity | IEP | HCCA |
MF | GO:0004601 | peroxidase activity | IEP | HCCA |
BP | GO:0006457 | protein folding | IEP | HCCA |
BP | GO:0006544 | glycine metabolic process | IEP | HCCA |
BP | GO:0006546 | glycine catabolic process | IEP | HCCA |
BP | GO:0009063 | amino acid catabolic process | IEP | HCCA |
BP | GO:0009069 | serine family amino acid metabolic process | IEP | HCCA |
BP | GO:0009071 | serine family amino acid catabolic process | IEP | HCCA |
MF | GO:0015035 | protein-disulfide reductase activity | IEP | HCCA |
MF | GO:0015036 | disulfide oxidoreductase activity | IEP | HCCA |
BP | GO:0016054 | organic acid catabolic process | IEP | HCCA |
MF | GO:0016209 | antioxidant activity | IEP | HCCA |
MF | GO:0016491 | oxidoreductase activity | IEP | HCCA |
MF | GO:0016638 | oxidoreductase activity, acting on the CH-NH2 group of donors | IEP | HCCA |
MF | GO:0016642 | oxidoreductase activity, acting on the CH-NH2 group of donors, disulfide as acceptor | IEP | HCCA |
MF | GO:0016667 | oxidoreductase activity, acting on a sulfur group of donors | IEP | HCCA |
MF | GO:0016684 | oxidoreductase activity, acting on peroxide as acceptor | IEP | HCCA |
BP | GO:0044248 | cellular catabolic process | IEP | HCCA |
BP | GO:0044282 | small molecule catabolic process | IEP | HCCA |
BP | GO:0046395 | carboxylic acid catabolic process | IEP | HCCA |
MF | GO:0051082 | unfolded protein binding | IEP | HCCA |
BP | GO:1901565 | organonitrogen compound catabolic process | IEP | HCCA |
BP | GO:1901605 | alpha-amino acid metabolic process | IEP | HCCA |
BP | GO:1901606 | alpha-amino acid catabolic process | IEP | HCCA |
No external refs found! |