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  5. Sam_g05884

Sam_g05884


Description : not classified & original description: none


Gene families : OG0000104 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000104_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g05884
Cluster HCCA: Cluster_11

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00547p00000030 evm_27.TU.AmTr_v1... Dirigent protein 19 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AT1G58170 No alias Disease resistance-responsive (dirigent-like protein)... 0.01 OrthoFinder output from all 47 species
AT3G13660 No alias Disease resistance-responsive (dirigent-like protein)... 0.02 OrthoFinder output from all 47 species
AT4G38700 No alias Disease resistance-responsive (dirigent-like protein)... 0.03 OrthoFinder output from all 47 species
Aev_g11919 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g21060 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g37770 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g12354 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g18969 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g31796 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Aop_g57314 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene52081.t1 Aspi01Gene52081 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g44535 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g13765 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01025397001 No alias Dirigent protein 19 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
GSVIVT01033445001 No alias No description available 0.04 OrthoFinder output from all 47 species
Gb_01833 No alias Dirigent protein 2 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Gb_12517 No alias Dirigent protein 23 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os07g01620.1 LOC_Os07g01620 Dirigent protein 1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os07g01660.1 LOC_Os07g01660 Dirigent protein 1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os10g25900.1 LOC_Os10g25900 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os11g07670.1 LOC_Os11g07670 Dirigent protein 21 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Len_g22477 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_10433639g0010 No alias Dirigent protein 19 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_110317g0010 No alias Dirigent protein 23 OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species
MA_45833g0010 No alias Disease resistance response protein 206 OS=Pisum sativum... 0.04 OrthoFinder output from all 47 species
MA_46031g0010 No alias Dirigent protein 1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_46983g0010 No alias Dirigent protein 1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_9538474g0010 No alias Dirigent protein 1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Mp7g14300.1 No alias Dirigent protein 1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Nbi_g08785 No alias stereoselective coupling control protein *(DIRIGENT) &... 0.04 OrthoFinder output from all 47 species
Ppi_g00601 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g61080 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0005.g002540 No alias not classified & original description: CDS=1-516 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0040.g012361 No alias not classified & original description: CDS=1-567 0.03 OrthoFinder output from all 47 species
Smo27549 No alias Dirigent protein 23 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Solyc10g008900.3.1 Solyc10g008900 Dirigent protein 19 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Spa_g01870 No alias stereoselective coupling control protein *(DIRIGENT) &... 0.02 OrthoFinder output from all 47 species
Zm00001e016900_P002 Zm00001e016900 Dirigent protein 2 OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0016409 palmitoyltransferase activity IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
BP GO:0032392 DNA geometric change IEP HCCA
BP GO:0032508 DNA duplex unwinding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
InterPro domains Description Start Stop
IPR004265 Dirigent 25 170
No external refs found!