1. Home
  2. Species
  3. Salvinia molesta
  4. Sequence
  5. Sam_g05663

Sam_g05663


Description : component *(eS25) of small ribosomal-subunit (SSU) proteome & original description: none


Gene families : OG0000493 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000493_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g05663

Target Alias Description ECC score Gene Family Method Actions
AT2G21580 No alias Ribosomal protein S25 family protein 0.03 OrthoFinder output from all 47 species
AT4G39200 No alias Ribosomal protein S25 family protein 0.03 OrthoFinder output from all 47 species
Aspi01Gene24877.t1 Aspi01Gene24877 component *(eS25) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000037.5 No alias 40S ribosomal protein S25-4 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Cre08.g382500 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.02 OrthoFinder output from all 47 species
GSVIVT01010721001 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.03 OrthoFinder output from all 47 species
LOC_Os08g44480.1 LOC_Os08g44480 component RPS25 of SSU proteome 0.02 OrthoFinder output from all 47 species
LOC_Os09g39540.1 LOC_Os09g39540 component RPS25 of SSU proteome 0.02 OrthoFinder output from all 47 species
MA_10430279g0010 No alias component RPS25 of SSU proteome 0.03 OrthoFinder output from all 47 species
Mp4g06120.1 No alias component RPS25 of SSU proteome 0.03 OrthoFinder output from all 47 species
Nbi_g37302 No alias component *(eS25) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Pir_g40564 No alias component *(eS25) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Pp3c14_13580V3.1 Pp3c14_13580 Ribosomal protein S25 family protein 0.02 OrthoFinder output from all 47 species
Pp3c17_4670V3.1 Pp3c17_4670 Ribosomal protein S25 family protein 0.02 OrthoFinder output from all 47 species
Pp3c1_25330V3.1 Pp3c1_25330 Ribosomal protein S25 family protein 0.02 OrthoFinder output from all 47 species
Sam_g20177 No alias component *(eS25) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Sam_g41630 No alias component *(eS25) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Solyc02g069850.3.1 Solyc02g069850 component RPS25 of SSU proteome 0.03 OrthoFinder output from all 47 species
Spa_g56876 No alias component *(eS25) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Tin_g43310 No alias component *(eS25) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Zm00001e019589_P001 Zm00001e019589 component RPS25 of SSU proteome 0.02 OrthoFinder output from all 47 species
Zm00001e022058_P001 Zm00001e022058 component RPS25 of SSU proteome 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEP HCCA
MF GO:0003839 gamma-glutamylcyclotransferase activity IEP HCCA
MF GO:0004664 prephenate dehydratase activity IEP HCCA
BP GO:0006558 L-phenylalanine metabolic process IEP HCCA
BP GO:0006575 cellular modified amino acid metabolic process IEP HCCA
BP GO:0006749 glutathione metabolic process IEP HCCA
BP GO:0006751 glutathione catabolic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
BP GO:0009072 aromatic amino acid metabolic process IEP HCCA
BP GO:0009073 aromatic amino acid family biosynthetic process IEP HCCA
BP GO:0009094 L-phenylalanine biosynthetic process IEP HCCA
BP GO:0009095 aromatic amino acid family biosynthetic process, prephenate pathway IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016836 hydro-lyase activity IEP HCCA
MF GO:0016840 carbon-nitrogen lyase activity IEP HCCA
MF GO:0016842 amidine-lyase activity IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0042219 cellular modified amino acid catabolic process IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0043171 peptide catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044273 sulfur compound catabolic process IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
BP GO:1902221 erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process IEP HCCA
BP GO:1902223 erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR004977 Ribosomal_S25 4 103
No external refs found!