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  5. Sam_g05478

Sam_g05478


Description : not classified & original description: none


Gene families : OG0001623 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001623_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g05478

Target Alias Description ECC score Gene Family Method Actions
Aob_g31145 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g43430 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g14434 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g19654 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g33018 No alias not classified & original description: none 0.12 OrthoFinder output from all 47 species
Nbi_g34027 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Ppi_g29871 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g47661 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g05285 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g21138 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Sam_g31527 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g32034 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Sam_g45941 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Sam_g46025 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Sam_g49348 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g34553 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g36795 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g47946 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004197 cysteine-type endopeptidase activity IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
BP GO:0050790 regulation of catalytic activity IEP HCCA
BP GO:0065009 regulation of molecular function IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
InterPro domains Description Start Stop
IPR000566 Lipocln_cytosolic_FA-bd_dom 5 129
No external refs found!