Sam_g05145

Description : SBP-type transcription factor & original description: none

Gene families : OG0000121 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000121_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Sam_g05145

Target	Alias	Description	ECC score	Gene Family Method
Cba_g36590	SPL7, ATSPL7	SBP-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Cre16.g673250	SPL2	RNA biosynthesis.transcriptional activation.SBP...	0.01	OrthoFinder output from all 47 species
Dcu_g12555	SPL8	SBP-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e013795_P002	SPL8, Zm00001e013795	transcription factor (SBP)	0.03	OrthoFinder output from all 47 species
Zm00001e030416_P001	SPL8, Zm00001e030416	transcription factor (SBP)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0015930	glutamate synthase activity	IEP	HCCA
MF	GO:0016638	oxidoreductase activity, acting on the CH-NH2 group of donors	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR004333	SBP_dom	165	209

External Links

No external refs found!