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  5. Sam_g05113

Sam_g05113


Description : not classified & original description: none


Gene families : OG0002387 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002387_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g05113
Cluster HCCA: Cluster_33

Target Alias Description ECC score Gene Family Method Actions
AT5G55480 SVL1 SHV3-like 1 0.03 OrthoFinder output from all 47 species
Adi_g019689 SVL3 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g059201 SVL5 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g15087 GPDL2, SHV3, MRH5 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g40029 GPDL2, SHV3, MRH5 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g14503 SVL5 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g08832 SVL4 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0090.g042622 SVL5 not classified & original description: CDS=159-2540 0.04 OrthoFinder output from all 47 species
Ceric.17G055600.1 SVL4, Ceric.17G055600 not classified & original description: pacid=50618819... 0.04 OrthoFinder output from all 47 species
Dac_g18847 SVL4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g31142 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g15330 GPDL2, SHV3, MRH5 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_18319 SVL1 Glycerophosphodiester phosphodiesterase GDPDL4... 0.03 OrthoFinder output from all 47 species
LOC_Os02g37590.1 GPDL2, SHV3,... Glycerophosphodiester phosphodiesterase GDPDL3... 0.03 OrthoFinder output from all 47 species
LOC_Os12g27102.1 SVL1, LOC_Os12g27102 Glycerophosphodiester phosphodiesterase GDPDL4... 0.02 OrthoFinder output from all 47 species
MA_10435620g0010 SVL1 Protein SUPPRESSOR OF NPR1-1 CONSTITUTIVE 4... 0.03 OrthoFinder output from all 47 species
Mp8g07940.1 SVL5 Glycerophosphodiester phosphodiesterase GDPDL7... 0.05 OrthoFinder output from all 47 species
Nbi_g10791 SVL5 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g05893 SVL5 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Solyc02g014490.4.1 SVL4, Solyc02g014490 Glycerophosphodiester phosphodiesterase GDPDL7... 0.02 OrthoFinder output from all 47 species
Zm00001e025069_P001 SVL5, Zm00001e025069 Glycerophosphodiester phosphodiesterase GDPDL7... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006629 lipid metabolic process IEA Interproscan
MF GO:0008081 phosphoric diester hydrolase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
InterPro domains Description Start Stop
IPR030395 GP_PDE_dom 44 302
No external refs found!