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  5. Sam_g05064

Sam_g05064


Description : EC_1.1 oxidoreductase acting on CH-OH group of donor & original description: none


Gene families : OG0000099 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000099_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g05064
Cluster HCCA: Cluster_21

Target Alias Description ECC score Gene Family Method Actions
Aev_g28246 ATB2 EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.06 OrthoFinder output from all 47 species
Als_g37693 ATB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g26602 ATB2 EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.02 OrthoFinder output from all 47 species
Aspi01Gene06833.t1 ATB2, Aspi01Gene06833 EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.03 OrthoFinder output from all 47 species
Dde_g10617 ATB2 EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.03 OrthoFinder output from all 47 species
Solyc09g097980.4.1 ATB2, Solyc09g097980 Auxin-induced protein PCNT115 OS=Nicotiana tabacum... 0.03 OrthoFinder output from all 47 species
Spa_g19254 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor &... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000808 origin recognition complex IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
CC GO:0005664 nuclear origin of replication recognition complex IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006275 regulation of DNA replication IEP HCCA
BP GO:0051052 regulation of DNA metabolic process IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR023210 NADP_OxRdtase_dom 5 217
No external refs found!