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  5. Sam_g04631

Sam_g04631


Description : not classified & original description: none


Gene families : OG0002291 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002291_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g04631

Target Alias Description ECC score Gene Family Method Actions
AT1G44446 CH1, ATCAO, CAO Pheophorbide a oxygenase family protein with Rieske... 0.05 OrthoFinder output from all 47 species
Als_g08325 CH1, ATCAO, CAO chlorophyllide a oxygenase *(CAO) & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g21224 CH1, ATCAO, CAO chlorophyllide a oxygenase *(CAO) & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0048.g030468 CH1, ATCAO, CAO chlorophyllide a oxygenase *(CAO) & original... 0.03 OrthoFinder output from all 47 species
Ceric.12G013500.1 CH1, ATCAO, CAO,... chlorophyllide a oxygenase *(CAO) & original... 0.03 OrthoFinder output from all 47 species
Ehy_g21909 CH1, ATCAO, CAO chlorophyllide a oxygenase *(CAO) & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os10g41780.1 CH1, ATCAO, CAO,... chlorophyllide a oxygenase 0.05 OrthoFinder output from all 47 species
Mp4g21140.1 CH1, ATCAO, CAO chlorophyllide a oxygenase 0.02 OrthoFinder output from all 47 species
Zm00001e018558_P002 CH1, ATCAO, CAO,... chlorophyllide a oxygenase 0.02 OrthoFinder output from all 47 species
Zm00001e028282_P003 CH1, ATCAO, CAO,... chlorophyllide a oxygenase 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005488 binding IEP HCCA
CC GO:0005886 plasma membrane IEP HCCA
MF GO:0010181 FMN binding IEP HCCA
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP HCCA
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!