Sam_g04499

Description : component *(bL34c) of large plastid ribosomal-subunit proteome & original description: none

Gene families : OG0007282 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007282_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Sam_g04499

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00021p00119000	evm_27.TU.AmTr_v1...	Protein biosynthesis.organelle translation...	0.08	OrthoFinder output from all 47 species
AT1G29070	No alias	Ribosomal protein L34	0.1	OrthoFinder output from all 47 species
Adi_g024734	No alias	component *(bL34c) of large plastid ribosomal-subunit...	0.02	OrthoFinder output from all 47 species
Aev_g01858	No alias	component *(bL34c) of large plastid ribosomal-subunit...	0.03	OrthoFinder output from all 47 species
Aspi01Gene00839.t1	Aspi01Gene00839	component *(bL34c) of large plastid ribosomal-subunit...	0.02	OrthoFinder output from all 47 species
Azfi_s0700.g082613	No alias	component *(bL34c) of large plastid ribosomal-subunit...	0.05	OrthoFinder output from all 47 species
Ceric.11G081600.1	Ceric.11G081600	component *(bL34c) of large plastid ribosomal-subunit...	0.07	OrthoFinder output from all 47 species
Cre01.g030050	No alias	Protein biosynthesis.organelle translation...	0.05	OrthoFinder output from all 47 species
Dde_g49422	No alias	component *(bL34c) of large plastid ribosomal-subunit...	0.02	OrthoFinder output from all 47 species
GSVIVT01021193001	No alias	Protein biosynthesis.organelle translation...	0.09	OrthoFinder output from all 47 species
Gb_28936	No alias	component psRPL34 of large ribosomal subunit proteome	0.06	OrthoFinder output from all 47 species
LOC_Os01g59060.1	LOC_Os01g59060	component psRPL34 of large ribosomal subunit proteome	0.08	OrthoFinder output from all 47 species
Len_g11773	No alias	component *(bL34c) of large plastid ribosomal-subunit...	0.06	OrthoFinder output from all 47 species
Lfl_g00226	No alias	component *(bL34c) of large plastid ribosomal-subunit...	0.07	OrthoFinder output from all 47 species
Mp1g06530.1	No alias	component psRPL34 of large ribosomal subunit proteome	0.09	OrthoFinder output from all 47 species
Msp_g30766	No alias	component *(bL34c) of large plastid ribosomal-subunit...	0.07	OrthoFinder output from all 47 species
Ore_g14577	No alias	component *(bL34c) of large plastid ribosomal-subunit...	0.03	OrthoFinder output from all 47 species
Pp3c18_19220V3.1	Pp3c18_19220	Ribosomal protein L34	0.03	OrthoFinder output from all 47 species
Pp3c21_6450V3.1	Pp3c21_6450	Ribosomal protein L34	0.01	OrthoFinder output from all 47 species
Ppi_g61745	No alias	component *(bL34c) of large plastid ribosomal-subunit...	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0032.g010804	No alias	component *(bL34c) of large plastid ribosomal-subunit...	0.04	OrthoFinder output from all 47 species
Solyc01g056780.3.1	Solyc01g056780	component psRPL34 of large ribosomal subunit proteome	0.1	OrthoFinder output from all 47 species
Spa_g04308	No alias	component *(bL34c) of large plastid ribosomal-subunit...	0.07	OrthoFinder output from all 47 species
Spa_g14614	No alias	component *(bL34c) of large plastid ribosomal-subunit...	0.08	OrthoFinder output from all 47 species
Zm00001e019534_P001	Zm00001e019534	component psRPL34 of large ribosomal subunit proteome	0.09	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0050660	flavin adenine dinucleotide binding	IEP	HCCA
MF	GO:0071949	FAD binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000271	Ribosomal_L34	97	132

External Links

No external refs found!

Sam_g04499

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation