Sam_g04482


Description : not classified & original description: none


Gene families : OG0000781 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000781_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g04482

Target Alias Description ECC score Gene Family Method Actions
AT1G66960 No alias Terpenoid cyclases family protein 0.04 OrthoFinder output from all 47 species
AT1G78960 ATLUP2, LUP2 lupeol synthase 2 0.02 OrthoFinder output from all 47 species
Dac_g19109 CAS1 triterpenoid synthase & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g31791 CAS1 EC_5.4 intramolecular transferase & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01015994001 CAS1 Secondary metabolism.terpenoids.terpenoid... 0.05 OrthoFinder output from all 47 species
GSVIVT01021474001 CAMS1 Secondary metabolism.terpenoids.terpenoid... 0.03 OrthoFinder output from all 47 species
GSVIVT01029502001 No alias Beta-Amyrin Synthase 1 OS=Panax ginseng 0.03 OrthoFinder output from all 47 species
GSVIVT01029508001 No alias Secondary metabolism.terpenoids.terpenoid... 0.05 OrthoFinder output from all 47 species
GSVIVT01029511001 CAS1 Secondary metabolism.terpenoids.terpenoid... 0.04 OrthoFinder output from all 47 species
Sam_g18660 No alias EC_5.4 intramolecular transferase & original description: none 0.03 OrthoFinder output from all 47 species
Solyc04g070980.4.1 CAS1, Solyc04g070980 triterpenoid synthase. cycloartenol synthase 0.02 OrthoFinder output from all 47 species
Zm00001e025848_P001 CAS1, Zm00001e025848 Parkeol synthase OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004497 monooxygenase activity IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!