Sam_g04137


Description : not classified & original description: none


Gene families : OG0000036 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g04137

Target Alias Description ECC score Gene Family Method Actions
Aev_g03847 No alias transcription factor *(CLAUSA) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g42445 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene00238.t1 Aspi01Gene00238 transcription factor *(CLAUSA) & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g16839 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
GSVIVT01007064001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 OrthoFinder output from all 47 species
LOC_Os03g03760.1 LOC_Os03g03760 G2-like GARP transcription factor 0.03 OrthoFinder output from all 47 species
LOC_Os03g20900.1 LOC_Os03g20900 G2-like GARP transcription factor 0.03 OrthoFinder output from all 47 species
MA_1432g0010 No alias Protein PHOSPHATE STARVATION RESPONSE 1 OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species
Sam_g39281 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Solyc02g080730.2.1 Solyc02g080730 G2-like GARP transcription factor 0.03 OrthoFinder output from all 47 species
Solyc11g067280.2.1 Solyc11g067280 G2-like GARP transcription factor 0.03 OrthoFinder output from all 47 species
Zm00001e005797_P001 KAN4, ATS, Zm00001e005797 G2-like GARP transcription factor 0.02 OrthoFinder output from all 47 species
Zm00001e030364_P002 Zm00001e030364 G2-like GARP transcription factor 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
CC GO:0005789 endoplasmic reticulum membrane IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007029 endoplasmic reticulum organization IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030118 clathrin coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030125 clathrin vesicle coat IEP HCCA
CC GO:0030130 clathrin coat of trans-Golgi network vesicle IEP HCCA
CC GO:0030132 clathrin coat of coated pit IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
CC GO:0098797 plasma membrane protein complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!