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  5. Sam_g04100

Sam_g04100


Description : not classified & original description: none


Gene families : OG0001164 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001164_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g04100

Target Alias Description ECC score Gene Family Method Actions
Adi_g036565 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g045932 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g125017 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene01177.t1 CIP7, Aspi01Gene01177 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene40488.t1 Aspi01Gene40488 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.06G030300.1 CIP7, Ceric.06G030300 not classified & original description: pacid=50620816... 0.02 OrthoFinder output from all 47 species
Dde_g15912 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Mp5g20180.1 No alias COP1-interacting protein 7 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Pir_g61100 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g04219 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g51564 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004807 triose-phosphate isomerase activity IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
MF GO:0015291 secondary active transmembrane transporter activity IEP HCCA
MF GO:0015293 symporter activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
MF GO:0016860 intramolecular oxidoreductase activity IEP HCCA
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA

No InterPro domains available for this sequence

No external refs found!