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  5. Sam_g04074

Sam_g04074


Description : not classified & original description: none


Gene families : OG0000374 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000374_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g04074

Target Alias Description ECC score Gene Family Method Actions
LOC_Os04g51400.2 LOC_Os04g51400 E3 ubiquitin-protein ligase MBR2 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os04g55510.1 LOC_Os04g55510 Probable E3 ubiquitin-protein ligase HIP1 OS=Oryza... 0.02 OrthoFinder output from all 47 species
MA_20229g0010 No alias Probable E3 ubiquitin-protein ligase RHG1A... 0.02 OrthoFinder output from all 47 species
MA_4841455g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Solyc12g088740.2.1 Solyc12g088740 Probable E3 ubiquitin-protein ligase RHG1A... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005730 nucleolus IEP HCCA
BP GO:0010024 phytochromobilin biosynthetic process IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
MF GO:0016636 oxidoreductase activity, acting on the CH-CH group of donors, iron-sulfur protein as acceptor IEP HCCA
BP GO:0022613 ribonucleoprotein complex biogenesis IEP HCCA
BP GO:0033013 tetrapyrrole metabolic process IEP HCCA
BP GO:0033014 tetrapyrrole biosynthetic process IEP HCCA
BP GO:0042254 ribosome biogenesis IEP HCCA
BP GO:0043648 dicarboxylic acid metabolic process IEP HCCA
BP GO:0043650 dicarboxylic acid biosynthetic process IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
MF GO:0050897 cobalt ion binding IEP HCCA
BP GO:0051202 phytochromobilin metabolic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!