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  5. Sam_g03986

Sam_g03986


Description : lytic vacuole protein sorting receptor *(VSR) & original description: none


Gene families : OG0000585 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000585_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g03986

Target Alias Description ECC score Gene Family Method Actions
Adi_g051957 VSR4, VSR2;1,... lytic vacuole protein sorting receptor *(VSR) & original... 0.02 OrthoFinder output from all 47 species
Adi_g108818 VSR2;2, ATVSR3,... lytic vacuole protein sorting receptor *(VSR) & original... 0.03 OrthoFinder output from all 47 species
Als_g05664 VSR2;2, ATVSR3,... lytic vacuole protein sorting receptor *(VSR) & original... 0.02 OrthoFinder output from all 47 species
Ceric.18G077500.1 VSR4, VSR2;1,... lytic vacuole protein sorting receptor *(VSR) & original... 0.02 OrthoFinder output from all 47 species
Cre02.g095111 VSR2;2, ATVSR3,... Vesicle trafficking.endomembrane trafficking.vacuolar... 0.02 OrthoFinder output from all 47 species
GSVIVT01030177001 AtVSR2,... Vesicle trafficking.endomembrane trafficking.vacuolar... 0.03 OrthoFinder output from all 47 species
MA_10432052g0010 VSR2;2, ATVSR3,... vacuolar sorting receptor (VSR) 0.03 OrthoFinder output from all 47 species
Pir_g14170 VSR2;2, ATVSR3,... lytic vacuole protein sorting receptor *(VSR) & original... 0.02 OrthoFinder output from all 47 species
Solyc01g107130.4.1 VSR2;2, ATVSR3,... vacuolar sorting receptor (VSR) 0.02 OrthoFinder output from all 47 species
Zm00001e038238_P001 VSR2;2, ATVSR3,... vacuolar sorting receptor (VSR) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0006720 isoprenoid metabolic process IEP HCCA
BP GO:0008299 isoprenoid biosynthetic process IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR026823 cEGF 64 83
No external refs found!