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  5. Sam_g03875

Sam_g03875


Description : not classified & original description: none


Gene families : OG0002602 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002602_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g03875

Target Alias Description ECC score Gene Family Method Actions
Ala_g06252 QUL1 pectin methyltransferase *(QUA2) involved in... 0.04 OrthoFinder output from all 47 species
Als_g07467 OSU1, QUA2, TSD2 pectin methyltransferase *(QUA2) involved in... 0.02 OrthoFinder output from all 47 species
Aop_g29423 QUL2 pectin methyltransferase *(QUA2) involved in... 0.02 OrthoFinder output from all 47 species
Cba_g12714 OSU1, QUA2, TSD2 pectin methyltransferase *(QUA2) involved in... 0.03 OrthoFinder output from all 47 species
Cba_g14166 QUL2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g24542 OSU1, QUA2, TSD2 pectin methyltransferase *(QUA2) involved in... 0.03 OrthoFinder output from all 47 species
Ceric.18G036700.1 OSU1, QUA2,... pectin methyltransferase *(QUA2) involved in... 0.02 OrthoFinder output from all 47 species
Dac_g07135 OSU1, QUA2, TSD2 pectin methyltransferase *(QUA2) involved in... 0.03 OrthoFinder output from all 47 species
Dcu_g13423 OSU1, QUA2, TSD2 pectin methyltransferase *(QUA2) involved in... 0.02 OrthoFinder output from all 47 species
Dde_g07187 QUL1 pectin methyltransferase *(QUA2) involved in... 0.03 OrthoFinder output from all 47 species
Gb_33593 OSU1, QUA2, TSD2 Probable pectin methyltransferase QUA2 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Len_g03898 QUL2 pectin methyltransferase *(QUA2) involved in... 0.03 OrthoFinder output from all 47 species
Len_g19714 OSU1, QUA2, TSD2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g14957 QUL1 pectin methyltransferase *(QUA2) involved in... 0.03 OrthoFinder output from all 47 species
Spa_g16410 QUL2 pectin methyltransferase *(QUA2) involved in... 0.02 OrthoFinder output from all 47 species
Spa_g35017 OSU1, QUA2, TSD2 not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008168 methyltransferase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006479 protein methylation IEP HCCA
MF GO:0008170 N-methyltransferase activity IEP HCCA
BP GO:0008213 protein alkylation IEP HCCA
MF GO:0008276 protein methyltransferase activity IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
MF GO:0016278 lysine N-methyltransferase activity IEP HCCA
MF GO:0016279 protein-lysine N-methyltransferase activity IEP HCCA
MF GO:0016538 cyclin-dependent protein serine/threonine kinase regulator activity IEP HCCA
BP GO:0016570 histone modification IEP HCCA
BP GO:0016571 histone methylation IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
BP GO:0018022 peptidyl-lysine methylation IEP HCCA
MF GO:0018024 histone lysine N-methyltransferase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018205 peptidyl-lysine modification IEP HCCA
MF GO:0019207 kinase regulator activity IEP HCCA
MF GO:0019887 protein kinase regulator activity IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
BP GO:0032259 methylation IEP HCCA
BP GO:0034968 histone lysine methylation IEP HCCA
MF GO:0042054 histone methyltransferase activity IEP HCCA
CC GO:0042575 DNA polymerase complex IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0043414 macromolecule methylation IEP HCCA
CC GO:0043625 delta DNA polymerase complex IEP HCCA
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR004159 Put_SAM_MeTrfase 245 575
No external refs found!