Sam_g03873

Description : component *(uL2m) of large mitoribosomal-subunit proteome & original description: none

Gene families : OG0002194 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002194_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Sam_g03873
Cluster	HCCA: Cluster_131

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00001p00272570	evm_27.TU.AmTr_v1...	Protein biosynthesis.organelle translation...	0.02	OrthoFinder output from all 47 species
AMTR_s00071p00011090	RPL2.1,...	50S ribosomal protein L2, chloroplastic OS=Amborella trichopoda	0.02	OrthoFinder output from all 47 species
ATCG00830	RPL2.1	ribosomal protein L2	0.02	OrthoFinder output from all 47 species
ATCG01310	RPL2.2	ribosomal protein L2	0.02	OrthoFinder output from all 47 species
Aev_g14432	RPL2.1	component *(uL2c) of large plastid ribosomal-subunit...	0.02	OrthoFinder output from all 47 species
Aev_g24286	No alias	component *(uL2m) of large mitoribosomal-subunit...	0.02	OrthoFinder output from all 47 species
Ala_g18429	RPL2.1	component *(uL2c) of large plastid ribosomal-subunit...	0.04	OrthoFinder output from all 47 species
Ala_g38158	No alias	component *(uL2m) of large mitoribosomal-subunit...	0.03	OrthoFinder output from all 47 species
Als_g02447	No alias	component *(uL2m) of large mitoribosomal-subunit...	0.07	OrthoFinder output from all 47 species
Aob_g13898	RPL2.1	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g61267	No alias	component *(uL2m) of large mitoribosomal-subunit...	0.07	OrthoFinder output from all 47 species
Ceric.05G042700.1	RPL2.1, Ceric.05G042700	not classified & original description: pacid=50577724...	0.03	OrthoFinder output from all 47 species
Ceric.23G029300.1	Ceric.23G029300	not classified & original description: pacid=50611505...	0.03	OrthoFinder output from all 47 species
Ceric.25G023800.1	Ceric.25G023800	not classified & original description: pacid=50593099...	0.03	OrthoFinder output from all 47 species
Dde_g21793	RPL2	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Len_g13282	No alias	component *(uL2m) of large mitoribosomal-subunit...	0.06	OrthoFinder output from all 47 species
Lfl_g13189	RPL2.1	component *(uL2c) of large plastid ribosomal-subunit...	0.03	OrthoFinder output from all 47 species
Lfl_g32423	No alias	component *(uL2m) of large mitoribosomal-subunit...	0.04	OrthoFinder output from all 47 species
Mp1g19370.1	No alias	no hits & (original description: none)	0.05	OrthoFinder output from all 47 species
Nbi_g39693	No alias	component *(uL2m) of large mitoribosomal-subunit...	0.05	OrthoFinder output from all 47 species
Ore_g43250	RPL2.1	component *(uL2c) of large plastid ribosomal-subunit...	0.03	OrthoFinder output from all 47 species
Pir_g37334	No alias	component *(uL2m) of large mitoribosomal-subunit...	0.04	OrthoFinder output from all 47 species
Spa_g56424	RPL2	component *(uL2m) of large mitoribosomal-subunit...	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0005524	ATP binding	IEP	HCCA
MF	GO:0030554	adenyl nucleotide binding	IEP	HCCA
MF	GO:0032559	adenyl ribonucleotide binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR022669	Ribosomal_L2_C	230	354
IPR022666	Rbsml_prot_L2_RNA-bd_dom	22	74

External Links

No external refs found!

Sam_g03873

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation