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  5. Sam_g03582

Sam_g03582


Description : UBQ ubiquitin-fold protein & original description: none


Gene families : OG0000000 (OrthoFinder output from all 39 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g03582
Cluster HCCA: Cluster_13

Target Alias Description ECC score Gene Family Method Actions
Cba_g36977 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.05 OrthoFinder output from all 39 species
Cba_g47088 No alias UBQ ubiquitin-fold protein & original description: none 0.03 OrthoFinder output from all 39 species
Dac_g25250 UBQ3 UBQ ubiquitin-fold protein & original description: none 0.03 OrthoFinder output from all 39 species
Dac_g26444 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.03 OrthoFinder output from all 39 species
GSVIVT01038617001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.03 OrthoFinder output from all 39 species
Nbi_g25794 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.05 OrthoFinder output from all 39 species
Nbi_g32315 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.04 OrthoFinder output from all 39 species
Nbi_g35705 No alias UBQ ubiquitin-fold protein & original description: none 0.03 OrthoFinder output from all 39 species
Ore_g31706 No alias UBQ ubiquitin-fold protein & original description: none 0.05 OrthoFinder output from all 39 species
Spa_g36306 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.02 OrthoFinder output from all 39 species
Spa_g41871 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.03 OrthoFinder output from all 39 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR000626 Ubiquitin-like_dom 78 149
IPR000626 Ubiquitin-like_dom 2 73
No external refs found!