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  5. Sam_g03417

Sam_g03417


Description : not classified & original description: none


Gene families : OG0000378 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000378_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g03417
Cluster HCCA: Cluster_107

Target Alias Description ECC score Gene Family Method Actions
Ehy_g15595 DCL1, CAF,... endoribonuclease *(DCL3) & original description: none 0.02 OrthoFinder output from all 47 species
MA_10437243g0010 DCL1, CAF,... endoribonuclease component DCL1 of DCL1-HYL1 miRNA... 0.02 OrthoFinder output from all 47 species
Smo444049 DCL1, CAF,... RNA biosynthesis.siRNA biogenesis.DCL-type endoribonuclease 0.02 OrthoFinder output from all 47 species
Zm00001e000158_P001 DCL1, CAF,... endoribonuclease component DCL1 of DCL1-HYL1 miRNA... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
MF GO:0016787 hydrolase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
MF GO:0015018 galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity IEP HCCA
MF GO:0015020 glucuronosyltransferase activity IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
InterPro domains Description Start Stop
IPR006935 Helicase/UvrB_N 14 85
No external refs found!