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  5. Lfl_g25627

Lfl_g25627 (SHI)


Aliases : SHI

Description : SRS-type transcription factor & original description: none


Gene families : OG0001235 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001235_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g25627
Cluster HCCA: Cluster_61

Target Alias Description ECC score Gene Family Method Actions
AT1G19790 SRS7 SHI-related sequence 7 0.03 OrthoFinder output from all 47 species
Adi_g043584 LRP1 SRS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g16410 LRP1 SRS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0092.g043005 SRS5 SRS-type transcription factor & original description: CDS=39-1118 0.03 OrthoFinder output from all 47 species
Ceric.02G095600.1 SHI, Ceric.02G095600 SRS-type transcription factor & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.25G035200.1 SRS1, STY1,... SRS-type transcription factor & original description:... 0.02 OrthoFinder output from all 47 species
GSVIVT01024206001 SHI RNA biosynthesis.transcriptional activation.SRS... 0.03 OrthoFinder output from all 47 species
Mp3g19510.1 SHI transcription factor (SRS) 0.03 OrthoFinder output from all 47 species
Solyc02g062400.3.1 SRS1, STY1,... transcription factor (SRS) 0.03 OrthoFinder output from all 47 species
Tin_g29778 SRS1, STY1 SRS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e004006_P001 SHI, Zm00001e004006 transcription factor (SRS) 0.03 OrthoFinder output from all 47 species
Zm00001e010227_P001 SRS1, STY1,... transcription factor (SRS) 0.02 OrthoFinder output from all 47 species
Zm00001e013256_P002 SHI, Zm00001e013256 transcription factor (SRS) 0.02 OrthoFinder output from all 47 species
Zm00001e030189_P001 SHI, Zm00001e030189 transcription factor (SRS) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006950 response to stress IEP HCCA
BP GO:0006952 defense response IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008171 O-methyltransferase activity IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA

No InterPro domains available for this sequence

No external refs found!