Sam_g02562


Description : not classified & original description: none


Gene families : OG0000419 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000419_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g02562
Cluster HCCA: Cluster_16

Target Alias Description ECC score Gene Family Method Actions
Als_g51099 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g31289 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.1Z016900.1 Ceric.1Z016900 not classified & original description: pacid=50573546... 0.03 OrthoFinder output from all 47 species
Ceric.1Z017000.1 Ceric.1Z017000 not classified & original description: pacid=50573547... 0.03 OrthoFinder output from all 47 species
Ceric.1Z204300.1 Ceric.1Z204300 not classified & original description: pacid=50607783... 0.03 OrthoFinder output from all 47 species
Cre09.g394473 No alias No description available 0.02 OrthoFinder output from all 47 species
Gb_11718 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_16706 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_25109 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp1g16100.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Sam_g10907 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g15920 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:2001070 starch binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004497 monooxygenase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
MF GO:0008171 O-methyltransferase activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0020037 heme binding IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
InterPro domains Description Start Stop
IPR002044 CBM_fam20 43 115
No external refs found!