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  5. Sam_g02107

Sam_g02107


Description : not classified & original description: none


Gene families : OG0001411 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001411_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g02107
Cluster HCCA: Cluster_183

Target Alias Description ECC score Gene Family Method Actions
Sacu_v1.1_s0043.g012834 No alias not classified & original description: CDS=1-1080 0.03 OrthoFinder output from all 47 species
Sam_g01343 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g01734 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g02498 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g02855 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g04938 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g16225 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g21413 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g24609 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g25235 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g25726 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Sam_g29417 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g32159 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g34416 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g34708 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g36835 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g39594 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g41463 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g44719 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g47917 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
BP GO:0006720 isoprenoid metabolic process IEP HCCA
BP GO:0006721 terpenoid metabolic process IEP HCCA
BP GO:0008299 isoprenoid biosynthetic process IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
MF GO:0008661 1-deoxy-D-xylulose-5-phosphate synthase activity IEP HCCA
MF GO:0010181 FMN binding IEP HCCA
BP GO:0016114 terpenoid biosynthetic process IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016744 transketolase or transaldolase activity IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0020037 heme binding IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!